KEGG   Quercus suber (cork oak): 112017833
Entry
112017833         CDS       T05868                                 
Name
(RefSeq) SART-1 family protein DOT2-like isoform X1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112017833
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:qsu03041]
    112017833
   04121 Ubiquitin system [BR:qsu04121]
    112017833
Spliceosome [BR:qsu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    112017833
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    112017833
Ubiquitin system [BR:qsu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112017833
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 112017833
NCBI-ProteinID: XP_023906058
LinkDB
Position
Unknown
AA seq 882 aa
MDMEWSDSKYEHREERDDESPMREHYDDLEQDGTDKSSKHRSKDRKKGSRGGEDKEHRSK
DRERSKRSSDDVVKEREKESSRDRRKDDRDEREKDRSKDSKVRDKEYDREKYREKERDRD
KDRKDRGKDRERERERERDAEKDSDRGRDKERVKEKNRDRDRDKEREKERDRPKEKEREK
ERDKYKDLEGSKSKLDHEDNRDRDASKQGRLSHHAETEENTEGSLGGAHLSASELEERIL
KKREERLNKNSEGVSEVLSWVSRSRKLEEKRNAEKEKALRLSKIFAEQDNVGQGDSEDEE
ESHGTAHNLAGVKVLHGIDKVVEGGAVVLTLKDQNILADGDINEEIDMLENVELGEQKQR
DEAYKAAKKKTGIYEDKFNDDPSAEKKMLPQYDDPTADEGLALDERGRFSGEAEKKLQEL
RKRLEGASNNIHFEDLNAIGKITSDYYTQEEMLKFKKPKKKKSLRKKEKLDLDALEAEAL
SSGLGVGDLGSRNDARRQAIKEEQERAEAELRKNAYQSAYAKADEASKSLRMEQTLTVKL
EEDENPVFADEDDDLYKSLERARKLALKKQEEEAASGPQAIARLATTASSQTAEDLNPTT
GESQENKVVFTEMEEFVWGLQLDEEARKPENEDVFMQEDEEPRASNEEVKDEAGGWTEVK
DVSEDEHPADEDKEEIVPDEAIHEVAVGKGLSGALKLLKDRGTLKESIEWGGRNMDKKKS
KLVGIVDDDEPKEPRSSALVDFKKEIRIERTDEFGRIMTPKEAFRMISHKFHGKGPGKMK
LEKRMKQYHEELKLKRMENSDTPSKAVEKMKEAQMQLKTPYLVLSGHVKPGQTSDPRSGF
ATVEKDFPGGLTPMLGDRKVEHFLGIKRKTEPANSAPKKPKP
NT seq 2649 nt   +upstreamnt  +downstreamnt
atggacatggaatggtctgattcgaagtatgaacaccgcgaagagagggatgatgagtct
ccaatgcgtgaacattatgatgatttagaacaggatgggactgataaatcgagcaagcac
cgaagcaaggataggaagaagggtagtcggggaggggaagataaggaacataggagtaaa
gaccgagaacgatcaaagagaagtagcgatgatgttgtgaaggaaagagagaaagaaagc
agtagggataggaggaaagatgatagagatgagcgagagaaggataggagcaaagatagt
aaggtgagggacaaagaatatgatagggaaaaatatagagagaaagagcgcgatagggat
aaagatagaaaagatcgagggaaagaccgtgagagggagagggagagggagagagatgca
gagaaagatagtgatcgaggacgagacaaggagagggtaaaggagaagaacagggatagg
gatagagataaagaaagagaaaaggaaagggataggccaaaggaaaaggaaagggaaaag
gagagagataagtataaggatcttgaaggaagcaaatctaagctggaccatgaagataat
agggatagggatgcttccaagcaagggaggttatcccatcatgctgagactgaagaaaat
actgaggggtcattaggtggagcacacttgtcggcatcagagcttgaggagcgaatattg
aagaaaagagaagaaagattgaacaaaaattctgaaggtgtttctgaagttttgtcatgg
gttagtcggagtcgtaagctcgaggagaaaaggaatgctgaaaaggagaaagcattgcgg
ctctcaaagatttttgcggaacaggacaatgttggtcaaggagacagtgaagatgaggaa
gaaagccacggtactgcgcataatctggcaggagttaaagttcttcatggcattgacaaa
gtagtggaaggtggggcagttgttttaacactaaaagatcagaatatacttgcagatggt
gacatcaatgaagagattgatatgcttgagaatgttgaacttggagaacaaaagcagcga
gatgaggcttacaaggctgcaaagaagaaaacagggatctatgaggataagtttaatgat
gatcccagtgcagagaagaaaatgttgccacagtatgatgaccccactgcagatgagggg
ttagctctggatgaaagaggacgtttctctggcgaagcagagaaaaaactccaagagctt
cgtaaaaggttagagggtgcttccaataacattcactttgaagatctcaatgcaattggg
aagatcacatcagattactatactcaagaagaaatgcttaaatttaaaaagcccaagaaa
aagaaatccttgcggaagaaagagaagctggatttggatgcgcttgaagcagaagctctc
tcttcaggcttgggagttggggatcttggctctcggaatgatgcaaggaggcaagctatc
aaagaggagcaagaaagagcagaggctgaattgagaaaaaatgcataccagtcagcttat
gctaaagccgatgaggcatcaaaatcactgcggatggaacaaactcttactgttaaatta
gaggaagatgagaaccctgtttttgcagatgaagatgatgatctttataaatctttagaa
agagcaaggaaattggctcttaaaaagcaagaggaggaggcagcatctggtcctcaagca
attgcacgtcttgccactactgccagcagtcaaactgcagaagatctaaaccccacaact
ggagagtcgcaagaaaacaaggttgtctttacagagatggaggagtttgtctggggtctc
cagcttgatgaagaagcccgtaagcctgaaaatgaagatgtttttatgcaagaagatgaa
gagccaagagcttccaatgaagaagtaaaagatgaggctggtggatggaccgaagttaaa
gatgtcagtgaagatgagcaccctgctgatgaggacaaggaggagatagttccagatgaa
gctatccatgaagttgcagttgggaaagggttatcaggtgcgctgaagctgcttaaagat
cgaggaacacttaaagaaagcatcgagtggggtggcagaaacatggacaagaagaagagc
aaactcgtgggtattgtagatgatgatgaaccaaaggagcctcgttcatccgctctggtc
gattttaaaaaggagattcgcattgagcggacagatgaatttggacgaattatgactcca
aaggaagcctttcgtatgatttcacataagtttcatgggaagggtcctggcaaaatgaag
ctagaaaaacgcatgaagcaataccatgaagaattgaagttgaagcgcatggagaattca
gatacaccatcaaaggctgtggagaagatgaaggaagctcaaatgcagttaaagacgccc
tatcttgtccttagtggtcatgttaaaccagggcaaactagtgatcctagaagtggtttt
gctactgtcgagaaggactttcctgggggcttgacgccaatgcttggtgatagaaaggtt
gagcatttcttggggataaagcgtaaaactgagccagcaaattcagcaccaaagaagcct
aaaccttga

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