Quercus suber (cork oak): 112021799
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Entry
112021799 CDS
T05868
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
qsu
Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
qsu03016
]
112021799
Enzymes [BR:
qsu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
112021799
Transfer RNA biogenesis [BR:
qsu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
112021799
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
112021799
NCBI-ProteinID:
XP_023910134
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MSLSSVSARLTLLALLSASTFYCFYESRRLRKLKLSLQNPKPNCSLSKPKLFFVSQTGTS
KALAQRLFDLLAINDLAFDLIDPKDYEPEDLPKETLVLIVASTWEDGKAPASAKFFANWL
AESADDFRVGSLLLSNCNFAVFGVGSGAYGATFNSVARDFSKQMRAMGAREVLPVWEGDV
DSGDVDEVFDAWSVKVVGFLKRGGVVENGGGEVLVSESDGESVGEDEDSEEEGGDEGSDI
VDVEDIAGKAPLRKKTVTVTVAETNGKLNGKKDMVTPAIRASLEKQGYKIIGSHSGVKIC
RWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWQWKMDD
PLDIVNSAIDLHTNMIKQMKGVPGVTLERLMEGLSPRHCALSLVGEPIMYPEINTLVDEL
HRRKISTFLVTNAQFPEKIEMLRPVTQLYVSVDAATKDSLKAIDRPLFGDFWERFIDSLK
ALREKQQRTVYRLTLVKGWNTEAIDAYSKLFSIGKPDFVEIKGVTYCGTSATSKLTMENV
PWHSDVKAFSEALALRSQGEYEVACEHVHSCCVLLAKTDKFKVNGKWFTWIDYEKFHNLV
ASRKPFSSVDYMAATPSWAVYGAEEGGFDPGQSRYKKERRHKSSTD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtccctttcctctgtctcagctcgactcactctcttagctctcctctccgcctcaaca
ttctattgcttctacgaatctcgccgcttaagaaaactcaaactctctctacaaaatcct
aaacctaattgctccctttcgaaaccaaagctcttcttcgtttcccaaacaggcacctcc
aaagccctagctcaacgcttattcgatctcttagcgataaacgatctcgcattcgacctc
atcgatcccaaagattacgagcccgaagatcttccgaaagaaaccctagttttgatcgta
gcttcgacttgggaagatggtaaagctccagcgagtgcgaagttcttcgcgaactggctt
gcggagagcgccgatgactttagggttgggtctctgttgctctcgaattgtaacttcgcg
gttttcggcgtcgggagtggagcttacggagccacattcaactcggttgcgagggacttt
tcgaagcagatgagagcgatgggtgcgagggaggttttgcctgtttgggaaggagatgtg
gatagcggtgatgtagatgaggtgtttgatgcttggagtgttaaggtggttgggtttttg
aaacgtggcggtgtggtcgaaaatggtggtggagaagttttggtttctgagagcgatggt
gagagtgttggtgaagatgaggatagtgaagaagaaggcggtgacgagggttcggatatt
gttgatgttgaggatattgcagggaaagcgccgttgaggaagaagacggtgacagtgaca
gtggctgaaactaatggaaagttgaatgggaaaaaagatatggtgactccggcgattaga
gcaagcttagagaagcagggatataaaatcattggttcacatagtggtgtgaaaatttgt
agatggactaagtctcagcttagaggccgaggaggttgctacaagcactcattttatgga
attgagagtcataggtgcatggaggcaacccctagtttggcatgtgccaataaatgtgtt
ttctgttggaggcatcatacaaatcctgttggaaagagttggcagtggaagatggatgat
cccttagacattgtgaattctgccatagacctgcatacaaatatgattaagcaaatgaaa
ggagttcctggcgttacattggagcggttaatggaaggtctctcacctaggcattgtgcc
ttatcacttgttggtgaaccaataatgtacccagagatcaatacacttgtggatgagctg
caccggcggaaaatttctactttcctagtaacaaatgcacagtttcctgaaaaaattgaa
atgctgaggcctgtcacccagttatatgtaagcgtagatgctgcgacaaaggatagcttg
aaggcaattgataggccactctttggggatttttgggagcgcttcattgactccttaaaa
gctctcagggagaaacaacagcgaactgtctaccgcttgactctggtgaaaggctggaat
acagaagccattgatgcttattctaagctctttagcattggaaaacctgattttgttgaa
atcaaaggtgttacatattgtggaacgtctgctacatcaaaattgacaatggaaaatgta
ccctggcattctgatgtgaaagctttttctgaggccttagctctaagaagccaaggagag
tacgaggttgcatgtgaacatgtgcactcctgttgtgtactcctggcaaaaactgataag
tttaaggtcaacggcaagtggttcacatggatagattatgaaaagttccacaacttggtg
gcttctagaaaaccgtttagcagcgtggattacatggctgccacaccatcatgggctgtc
tatggagcagaagaaggtggatttgatccgggtcagtctcggtataagaaggagcgacgt
cacaaatccagcactgactga
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