Rahnella aquatilis HX2: Q7S_18990
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Entry
Q7S_18990 CDS
T01850
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
raa
Rahnella aquatilis HX2
Pathway
raa00470
D-Amino acid metabolism
raa00550
Peptidoglycan biosynthesis
raa01100
Metabolic pathways
raa01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
raa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Q7S_18990 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Q7S_18990 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Q7S_18990 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
raa01011
]
Q7S_18990 (ddl)
Enzymes [BR:
raa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Q7S_18990 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
raa01011
]
Precursor biosynthesis
Amino acid ligase
Q7S_18990 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
RimK
ATP-grasp_3
ATPgrasp_ST
TTL
Motif
Other DBs
NCBI-ProteinID:
AFE60007
LinkDB
All DBs
Position
complement(4137619..4138539)
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AA seq
306 aa
AA seq
DB search
MSEKVAVLLGGTSAERDVSLQSGAAVLAGLRESGVDAHGIDTKTFNVALLKEEGYSKVFI
ALHGRGGEDGTLQGLLEQIGLPYTGSGVMASALTMDKFRTKLVWQALGLPVTPFVALHRA
QIEEAGQGALAAKIAELGLPVIVKPSREGSSVGMSKVTTEKELLPALQEGFRHDDNVLIE
KWLSGPEYTVAIVGSQVMPSIRIQPAGTFYDYQAKYLSDETQYFCPSGLSEAQEQQLTAL
ALQAYQALDCSGWGRVDVMQDGDGNFNLLEVNTSPGMTSHSLVPMAAKHAGLSFPQLVFR
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaaagtagcggtattgttgggtggtacttccgcagaacgcgatgtgtcatta
cagtcaggtgctgcagtgctggctggtttacgcgaatccggtgttgatgcccacggcatt
gataccaaaacgtttaatgtggcgcttctcaaagaagaagggtacagcaaagtctttatc
gcacttcacggtcgcggtggcgaagacggaacgttgcagggtttgctggagcaaatcggt
ttgccttataccggcagcggcgtgatggcgtcggcgctcactatggacaagttccgcacc
aaactggtgtggcaggctttagggttaccggtcacgccgtttgtcgcactgcatcgtgca
caaattgaggaagcagggcagggcgctctggcggcaaaaatcgccgaattaggcctgccg
gtgatcgtcaaaccaagccgtgaaggttccagcgtcgggatgagcaaagtgacgactgaa
aaagagttgttacccgccctgcaggaaggcttcaggcatgacgataacgtactgatcgaa
aaatggctgagtggcccggaatataccgtggctatcgtgggcagccaggtgatgccctcg
attcgcatccagccagccggtacgttttatgactatcaggcaaaatatctgtctgatgaa
acacaatatttttgcccgagcggtttaagcgaagcgcaggagcagcagttgactgcactg
gccttgcaggcttatcaggcgctcgattgcagtggctggggacgtgtcgacgtcatgcag
gacggtgacggcaacttcaacttactggaagtgaatacgtcgccgggaatgaccagccac
agtctggtgccgatggcggctaaacacgccgggctgagtttcccgcaactcgttttccgt
attctggaactggcagactga
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