Rhodoferax antarcticus: RA876_08585
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Entry
RA876_08585 CDS
T04655
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rac
Rhodoferax antarcticus
Pathway
rac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RA876_08585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rac03019
]
RA876_08585
Enzymes [BR:
rac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RA876_08585
Messenger RNA biogenesis [BR:
rac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RA876_08585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Slu7
Motif
Other DBs
NCBI-ProteinID:
APW46420
LinkDB
All DBs
Position
1769214..1770884
Genome browser
AA seq
556 aa
AA seq
DB search
MIKRFFDKLLGKSAPAAAKNPFGKRLEIGPEVHGINPALVDERANNVVRTLKNAGFEAYI
VGGAVRDLMLGLAPKDFDVATNATPEQVKNLFRRAFIIGRRFRIVHVIYGRGREHEVIEV
STFRAYLDNAAAEQVAGNEKTSKSDLAGMKHAVDSTGRVLRDNVWGPQDEDAARRDFTIN
AMYYDPETQIVVDFHHGMKDAKARSIRMIGDAATRYREDPVRIIRAVRFAAKLHGLGFSL
EPKTASPLVKSQSLLLEVPQSRMFDEMLKLLQTGHALASIDKLKELGMARGIYPLLDVVV
ERAEQPFVKAALLDTDRRVGEGKPVAPSFLLACVLWADVRDGWVKRLAARQHSHPALMDA
IDDAFNARIGDVSGRGKLASDMRDIWTMQPRFEKRTGSAAFGLVEQPRFRAAFDFMRLRA
ENGELEEVLSDWWEAFSMADDNLRNDMVDAVKLEQQQRPKAARTPRVHKLPTRSADGLPA
ALSTAAAAPIPIDQNDADHVQAAATDGTEAPKKRRRKRRSPSRGAGEGATGGAGEGEGQG
EVQGASQAASRPETQN
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgattcttcgacaaactgctgggcaaatctgccccagccgcagcaaaaaac
ccctttggcaagcgcctggagatagggcctgaggtgcacggcatcaacccggcactggtg
gacgagcgtgccaacaacgtggtgcgcaccctgaaaaacgctggttttgaggcctacatc
gtcggcggcgcggtgcgcgacctgatgcttggcctggcccccaaagactttgatgtggct
accaacgccacccccgagcaggtgaaaaacctgttccggcgtgccttcatcatcgggcgg
cgctttcgcatcgtgcacgtgatctacgggcgcggtcgcgagcatgaggtgattgaggtg
tccacctttcgcgcctatctggacaacgccgccgccgagcaggtggcgggcaacgaaaaa
accagcaaaagtgatcttgcgggcatgaagcacgcggtggacagcaccggtcgtgtactg
cgcgacaacgtctggggaccgcaagatgaagacgccgcccggcgcgacttcaccatcaac
gccatgtattacgaccctgagacacaaatcgtcgtcgatttccaccatggcatgaaagat
gccaaggcgcgctcaatccgtatgattggtgatgcggccacgcgctaccgcgaagacccg
gtgcgcatcattcgcgcggtgcgttttgctgccaagttgcacggcctgggcttcagtctg
gagcccaaaaccgcctcgccactggtgaaaagccagtcactgctgctggaggtgccgcaa
agccgcatgtttgacgaaatgctcaagctgttgcaaaccggccacgcgttggcatctatc
gacaagctcaaggagcttggcatggcgcgcggtatttacccgctgctcgacgtggtggtg
gagcgtgctgagcagccgtttgtgaaagccgcgctgctagatactgaccgccgtgtgggt
gaaggcaagccggtggcacccagctttttactggcctgcgtgttgtgggcagatgtgcgc
gacggctgggtcaagcggctggcggcgcgacagcattcgcacccggcgctgatggacgcg
attgacgatgcgttcaacgcccgtattggtgacgtgtctggacgcggcaagctcgccagt
gacatgcgcgacatctggaccatgcaaccccgctttgaaaaacgcaccggcagtgctgct
tttggcctggtggaacagccgcgtttcagggcggcctttgacttcatgcgtctgcgtgca
gaaaacggcgagcttgaagaagtgctgtctgactggtgggaagcattcagcatggctgac
gacaacctgcgcaacgacatggtagacgcggtcaaactggagcaacagcagcgccccaaa
gcagcgcgcacgccgcgcgtgcacaagctgcccacgcgcagtgccgacggcttgcccgcg
gcgttgtcaaccgctgcggctgcgccaatcccgatcgatcaaaacgatgcagatcatgtg
caagccgccgcaaccgacggcacagaagcgcccaaaaagcgccgccgcaagcgccgcagc
cccagccgtggcgcaggtgaaggcgcgacaggtggcgctggtgaaggcgaaggtcagggt
gaggttcaaggcgcaagtcaagccgcctcccgcccagagacgcagaactga
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