Rhodoferax antarcticus: RA876_16120
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Entry
RA876_16120 CDS
T04655
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rac
Rhodoferax antarcticus
Brite
KEGG Orthology (KO) [BR:
rac00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rac01011
]
RA876_16120
Enzymes [BR:
rac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RA876_16120
Peptidoglycan biosynthesis and degradation proteins [BR:
rac01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RA876_16120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
APW47621
LinkDB
All DBs
Position
3320873..3322846
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AA seq
657 aa
AA seq
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MQFKMILTLIGLSGALAAPLVHAQSFTDSVLLEMQQAFRKGDADRLTQLLPQTTGHMLQP
WAAYWALSARLDSATPEEVANFFKQYRGTYQEDRLRNDWLLLLGKRRDWAAFAGVANDFR
MNDDREVRCYTLAMESILAKVDSADEVKAQWYAQKDAADGCTLAAQSHLAAGQLLDTDLW
RKARLTTEARQLSSTRLVVDLIAPEAAATLAEVLKQPERFLLKRTPSSQRQTQELAVLAL
IRWANSDPDSAAQALSERWSRQLSREQRAWAWGAIGKQAALKLSDSALLYFQNASPKGMS
DDHLAWRARAALRKHQWQDALDSINAMSADAASDSTWVYWRARALLQPGRTDTERVEARQ
SMQGLASVRGFYPMLAQEELGLPITPPAAPEPLTAQEKQRANANPGLQRALAAITLGLRS
EGVREWNYSTNLHLPGGMNDRELLAAADLACQNAVWDRCINTSERTRSVIDIAQRFPMPY
RQQVVAQSQAIGLDPAYVYGLIRQESRFIMDARSGVGASGLMQVMPATARWTAKKIGMTD
FKPYQINDRDTNIAIGTGYLKLVLDDFAGSMPLAAAAYNAGPGRPRVWRGQAGDPSLEAA
IWAENIPFTETRDYVKKVLANTTVYAALITGKTQSLKGRLGQVGPLGLDTLTNRDLP
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcagttcaagatgattttgacattgattggcctgagtggcgcgctggccgcgccgctt
gtccacgcccaaagctttaccgacagcgttttgctggaaatgcagcaagccttcagaaaa
ggtgacgccgaccgcctaacccagttgctaccccaaaccacaggccacatgttgcagcct
tgggcggcctactgggcactgagcgcgcggctggacagcgccacccctgaggaagtggcc
aactttttcaaacagtaccggggcacctaccaagaagaccgcctgcgcaacgactggctg
ctgctgctgggcaagcgccgcgactgggccgcctttgcgggcgtggccaacgactttcgc
atgaacgacgaccgcgaggtgcgctgttacaccctggccatggaaagcattctggccaag
gtggactcggctgacgaggtcaaagcccagtggtatgcccagaaagatgccgctgacggc
tgcaccctggccgcacaaagccacttggccgccgggcagctgctcgacaccgacttgtgg
cgcaaagcgcgtctgaccaccgaggctcggcagctcagcagcacccggctggtggtggac
ctgattgcccccgaggcggcggccacgctggccgaggttttgaaacagcccgaacgcttc
ctgctcaaacgcacaccctccagccaacgccaaacccaagagctggccgtgctggccttg
atccgctgggccaatagcgaccccgacagcgcggcgcaggcgctcagcgagcgctggagt
cggcagctcagccgggagcaacgcgcctgggcctggggggcgattggcaagcaggcagcg
ctgaaactctcggacagcgcgctgctctactttcaaaacgccagccccaaaggcatgagt
gatgaccacctggcctggcgcgcccgcgctgcgctgcgcaagcaccagtggcaggacgcg
ctcgacagcatcaacgccatgagtgcggacgccgccagcgacagcacctgggtctattgg
cgtgcgcgtgccttgttgcagcccgggcgcaccgacaccgaacgcgttgaggcccgccag
tcaatgcaaggcctggccagcgtgcgcggcttctacccaatgctggcgcaggaagaactg
ggcctgcccatcacgccgcctgccgcaccagagcctttgaccgcgcaggaaaagcagcgt
gccaacgccaaccccggcttgcagcgcgcgctggccgcaattaccctggggctgcgcagc
gagggcgtgcgcgagtggaactacagcaccaatttgcacctgcccggcggcatgaacgac
cgcgaactgctggccgcggctgacctggcgtgccaaaacgccgtgtgggaccgctgcatc
aacaccagcgagcgcacccgcagcgtgatcgacatcgcccagcgttttccgatgccttac
cgccagcaggtcgtggcgcaaagccaggccattggcctggacccggcctatgtgtatggg
ctgatccgccaggaaagccgcttcatcatggacgcccgctcgggcgtgggcgcctccggg
ttgatgcaggtaatgcccgccaccgcgcgctggacggccaagaagatcggcatgactgac
ttcaagccttaccagatcaatgaccgtgacaccaacattgccattggcaccggctacctc
aagctggtgctggacgactttgccggctccatgccgctggctgcggccgcctacaacgcc
ggccccgggcgaccgcgtgtctggcgcggccaggcgggtgacccgtcgctggaagccgcc
atctgggccgagaacatcccgttcaccgaaacccgtgactatgtgaaaaaggtgctggcc
aacaccaccgtctacgcagcgttgattaccggcaaaacccagtcgctcaaaggccgcttg
ggccaggttggtccgcttgggttggacaccctcaccaaccgcgacttgccatga
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