Riemerella anatipestifer ATCC 11845 = DSM 15868: RA0C_1306
Help
Entry
RA0C_1306 CDS
T02107
Name
(GenBank) udp-n-acetylmuramoylalanyl-D-glutamate-gene, 6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rai
Riemerella anatipestifer ATCC 11845 = DSM 15868
Pathway
rai00300
Lysine biosynthesis
rai00550
Peptidoglycan biosynthesis
rai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rai00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RA0C_1306
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RA0C_1306
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rai01011
]
RA0C_1306
Enzymes [BR:
rai01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RA0C_1306
Peptidoglycan biosynthesis and degradation proteins [BR:
rai01011
]
Precursor biosynthesis
Amino acid ligase
RA0C_1306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
MoCF_biosynth
Motif
Other DBs
NCBI-ProteinID:
AFD56206
UniProt:
E4TA46
LinkDB
All DBs
Position
complement(1302469..1303929)
Genome browser
AA seq
486 aa
AA seq
DB search
MLLRELLHNIPVLETIGALDVEVSSIVFDSRKAEAKSLYVAIKGSVSDGHQFIGSAVEKG
AKVIVLEDLPEILDETITYIKVKNLSKVLGQLASNFYGNPSEKLNLVGVTGTNGKTSVST
LLFDVFKNLGYPSALISTVEYRIGDEVFPSTHTTPDVVKLNELLAKAVAQGCEYAFMEVS
SHGIHQNRTEGLHFKVAGFTNITHDHLDYHKTFLEYLNTKKSFFDNLPDSAVAITNLDDK
NGLVMLQNTKAKKKTYALKTLSDYHGRLLEVDFNGMLLNFNGKEVWTSLTGKFNVYNLLL
VFGIARELGFDEVEILTAISQLKRVNGRFETIKSEGGIFFVVDYAHTPDALENILDSINE
IRTKNERLISVFGCGGDRDHSKRPEMGKIATQKSTLAIITSDNPRTEDPNTIIQEIEAGV
EPQCFSKYTVVPDRREAIKMAIKFAEPKDIILVAGKGHEIYQEVNGVKHHFDDKEVILEL
CKMMSK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgttactcagagagttattacataatataccagttttagaaaccatcggtgcattagat
gttgaggtaagctctattgtttttgatagtagaaaggcggaagcaaaaagcctttatgta
gctatcaaagggagtgtttcagatggacaccagttcattggttctgcagtagaaaaagga
gctaaagttattgtattggaagatttacctgaaattttagatgaaaccatcacttatatt
aaagtgaaaaatttgtctaaagtattggggcaattggcttctaacttctatggtaatcct
tcagaaaagcttaatcttgtaggagttacagggactaatggtaaaacatctgtatctact
ttgctttttgatgtttttaagaatttaggttatccatctgcacttatttccacggtggag
tataggattggcgacgaagttttcccatctacacacactacaccagacgtggttaaactt
aatgaactattggcaaaagccgtggcacaaggttgcgagtatgcctttatggaagtttct
tctcacggcattcatcaaaacagaacggaaggtttgcattttaaagtggcaggttttacc
aatattactcacgaccatttagactatcataaaacttttttagaataccttaataccaaa
aaatcattttttgataatttgccagattcagcggtagcaattactaatctagatgataaa
aacggattggtaatgctccaaaacaccaaggctaaaaagaaaacctatgcattaaaaact
ttaagtgattaccatggacgattgttagaggtggattttaacggaatgctgctcaatttt
aatggtaaagaagtttggacgagcctaacagggaagtttaatgtttataatttgctttta
gtgtttggtatagcgagagagttagggtttgatgaggtggaaatacttacggcaatttct
caactgaaaagagttaatggtaggtttgaaacgataaagtcagaaggcggaatctttttt
gtggtagattatgcacacacgccagatgctttagagaatattctagactctatcaacgaa
atacgaactaaaaacgaaaggttgattagtgtgtttggttgcggtggcgatagagaccat
agcaaacgccctgaaatgggtaaaatagctacacaaaaatctactctagcaattattaca
tcagacaaccctagaacagaagatcctaacaccattatccaagaaatagaggcgggcgtg
gagccacaatgctttagcaaatatacggtagttccagacagaagagaagctattaaaatg
gctataaaatttgcagagccaaaagatattatacttgtggcggggaaaggtcacgaaatt
tatcaagaagttaatggggtaaaacatcactttgatgataaagaggtgatattagaattg
tgtaaaatgatgagtaaatag
DBGET
integrated database retrieval system