Raineyella fluvialis: Rai3103_12320
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Entry
Rai3103_12320 CDS
T06259
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rain
Raineyella fluvialis
Pathway
rain03030
DNA replication
rain03430
Mismatch repair
rain03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rain00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rai3103_12320 (holA)
03430 Mismatch repair
Rai3103_12320 (holA)
03440 Homologous recombination
Rai3103_12320 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rain03032
]
Rai3103_12320 (holA)
03400 DNA repair and recombination proteins [BR:
rain03400
]
Rai3103_12320 (holA)
Enzymes [BR:
rain01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rai3103_12320 (holA)
DNA replication proteins [BR:
rain03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rai3103_12320 (holA)
DNA repair and recombination proteins [BR:
rain03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rai3103_12320 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
QGF25224
UniProt:
A0A5Q2FI36
LinkDB
All DBs
Position
2702152..2703066
Genome browser
AA seq
304 aa
AA seq
DB search
MLAARLVEQVVAVARAEDPSVEVVRTGAAGLEGGDFAQMTSGSLFAARSAVVIEDLAEAS
DSLAQALLAAAADPAPDIALVLVHRGGNKGKGVVDKLKKAKAAHFPVTALKPRELVGFVE
HEARTRGARLDPQVAQQLVDSVGTDLRSLVGAVDQLAQDSEDGLIREDLVRRFFQGRAEV
KGFTIADAALAGQTTRALEELRWALASGTAPVLITSAMASGVRGLGRLSGVRGRGNDNEV
AADIGVPPWKLRTMRQQLQRWDDLRLARAVRLVARADADVKGAADDAAYALDTMVLQVSR
LAGR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccgcgcgcctggtcgagcaggtcgtggccgtcgctcgggccgaggacccgtcg
gtcgaggtggtgcgtaccggtgctgccggtcttgaggggggcgacttcgcccagatgacc
tccggatccctgttcgccgccaggtcggccgtggtgatcgaggatctggcggaagcatct
gactccctggcgcaggccctgctcgcggcggcagccgatcccgcgcccgacatcgccctc
gtcctcgtccaccggggcggcaacaagggcaagggggtggtcgacaagctgaagaaggcg
aaggccgcccacttccctgtcaccgcgctgaagccgcgcgagctggtgggcttcgtcgag
cacgaggcccgcacccgaggggcgcggctcgacccccaagtggcccagcagctcgtcgac
agcgtcggcacggacctgaggtccctcgtcggagcggtcgatcagctcgcccaggacagc
gaggacggcctcatccgcgaggacctcgtccggaggttcttccagggccgcgctgaggtc
aaggggttcaccattgccgacgccgccctggcgggtcagaccacgcgagccctggaggag
ctccgctgggcgctggcgtcgggcaccgccccggtgctcatcaccagcgcgatggcctca
ggcgtacgcggattggggcggctgagcggggtccggggacggggaaatgacaacgaggtg
gcggctgacatcggagtgccgccgtggaagctgcggaccatgcgccagcagctccagcgg
tgggacgacctgcggctggcgcgggccgtccgtctcgtggcgcgcgccgacgccgacgtc
aagggcgcagcggacgacgccgcctacgccttggatacgatggtgctccaggtcagccgg
ctcgccggccgctga
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