Ruminococcus albus: Rumal_2657
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Entry
Rumal_2657 CDS
T01387
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ral
Ruminococcus albus
Pathway
ral03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ral00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Rumal_2657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ral03400
]
Rumal_2657
Enzymes [BR:
ral01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Rumal_2657
DNA repair and recombination proteins [BR:
ral03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Rumal_2657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
PIF1
HHH_5
AAA_22
T2SSE
Helicase_RecD
nSTAND3
UvrD-helicase
AAA
AAA_28
AAA_12
HerA_C
AAA_16
HHH_2
TrwB_AAD_bind
DUF815
AAA_24
SRP54
ABC_tran
UvrD_C
AAA_29
NTPase_1
MeaB
DEAD
Mg_chelatase
Thymidylate_kin
AAA_5
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ADU23132
UniProt:
E6UGK9
LinkDB
All DBs
Position
complement(2995209..2997467)
Genome browser
AA seq
752 aa
AA seq
DB search
MSEAEKIEGEVDRVQFKSDDGSFCVIDVNTGDDLIKAVGELGNIEEGESVILTGEYVKHR
TFGKQFRVQMFERSLPTGEASILRYLVSGALDSVKPVTAKRLVAAFGSDTLEIIENEPER
LTEVNGIDAKKADAIHEDFKKTFAARALLVYMSKNGVATKYGVRAWRKLGNSAEELIKSN
PYLLCTDGIELGFSKADEIAEAEFIPRDSEQRIRAGMAFVLRNAAREGGHTCIPVETLKR
DTVRLLDINAELFDKVKEIALEEQDIFELDISGVKYAMLHCYYKAEEYISRRLDVMRSIT
YDNKIDYSEIIDMEEQESGIKYEEKQRKAINLAISEGFLVLTGGPGTGKTTTLNAIISLF
EQQGLDVMIAAPTGRAAKRISDMTGCEAKTIHRLLEVIPSDGDRMLFVHDEDDLLDCEVM
VVDEMSMVDSVLFEALLRALSVTCKLILVGDSDQLPPVGPGNVLRDIIDSGVMSVVRLTE
VFRQAQESDIVMNAHRIVSGEMIDLKKRDRDFVYLRRPEAEDIYTTLVELCSDRLPKKYG
FSPIRDIQVLSPTRQGRIGTPELNKILQAELNPPDKKKAELKTAYGIYRVGDKVMQTRNN
YEISWTRTDGGKEENGKGVYNGDIGIVTAVRTSLKIVTIDFDGRIADYSGEILDDLELAY
AVTVHKSQGSEYDAVILTLYDGMDNLYYRNLLYTAVTRAKKLLVILGTAQRVGFMIMNNG
KNRRCTALRTMLMQAVSGDDMGQLQLEDLNGQ
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagcggaaaaaatagaaggcgaggtagaccgcgttcagttcaagagcgatgac
ggcagcttctgtgtcatagatgtcaacaccggtgatgaccttatcaaggctgtgggagaa
cttggcaatatcgaagaaggcgagagcgttatacttacaggtgagtatgtaaagcaccgt
accttcggtaaacagttccgcgtgcagatgtttgagagaagtctgccgacgggagaagct
tcgatacttcgctatctggtcagcggagcactggattcggtgaagcctgtgaccgccaag
cgtctggtagctgcattcggcagtgatactcttgagataattgaaaacgagcccgaacgt
ctcaccgaggtcaacggcatcgacgctaaaaaagccgatgctatacatgaggatttcaaa
aagaccttcgccgccagggcactgcttgtgtatatgagcaagaacggtgtagccacaaag
tacggtgtccgcgcatggagaaagctgggcaattcggcagaagaactgataaagtcaaat
ccatatcttctgtgtactgatggtatcgagcttggcttttcaaaggcagatgagatagcc
gaggcagagtttatcccccgtgacagtgagcagcggataagggcgggcatggcttttgtg
ctgagaaatgcagcgcgagagggcggacatacctgtatacctgtagaaacactgaaacgt
gatacagtccgtctgctggatataaatgcagaattgtttgataaagtcaaagagatcgct
cttgaggaacaggacatttttgaactggatataagcggtgtcaaatatgccatgctgcat
tgttattataaggcagaggaatatatttccagaagacttgatgtcatgcgaagtatcacc
tatgataacaagatcgactactccgagataatcgatatggaggagcaggagagcggcata
aagtatgaggagaaacagcgcaaagccataaacctcgcaatatccgagggctttcttgtc
ctgaccggcggtcccggtacaggcaagaccaccactctgaatgccataatctccctgttt
gaacagcagggtcttgatgttatgatagccgctcccacaggtcgtgcggcaaagcgtata
agcgatatgacaggctgtgaagccaaaactatccaccgccttcttgaagtcataccctct
gacggtgacaggatgctgttcgtacacgatgaggatgacctgcttgactgtgaggtaatg
gtggttgacgagatgtccatggtggacagcgtgctgtttgaagccctgctgagggcgctg
agcgttacctgcaagctgatacttgtgggtgacagtgaccagctgccgcccgtaggtccg
ggtaatgtacttcgggatatcattgacagcggtgtaatgtccgtagtaaggctgaccgag
gtcttccgtcaggcgcaggaatccgacatagtcatgaatgcccacaggatagtttcggga
gaaatgatagaccttaaaaagcgtgacagggattttgtctacctccgccgccccgaagcc
gaggatatatataccacactggttgaactctgcagcgacagacttcccaagaagtacggt
ttctctccgataagggatattcaggtgctatcacccacaagacaggggcgcataggcact
cccgagctcaataagatacttcaggcggagcttaatcctcctgataagaaaaaggctgag
ctgaaaactgcctatggtatataccgtgtgggagataaggtcatgcagacccgcaataat
tacgagataagctggactcgcacagacggcggaaaagaggaaaacggcaaaggtgtgtat
aacggtgatatcggtatagtcacagctgtgaggacttcactgaagatagtcaccatagat
tttgacggcaggatagctgattacagcggtgagattctggatgaccttgaacttgcatac
gccgtcaccgtacataaaagtcagggctctgagtatgatgcggtcatacttaccctctat
gacggcatggataatctctactaccgaaacctgttgtataccgcggtaacaagggcgaaa
aagctgttagttatactcggcactgctcagagagtgggcttcatgataatgaataacggc
aagaaccgcagatgtacagccctgcggacgatgctcatgcaggctgtcagcggtgatgat
atgggtcagcttcagcttgaagatctgaacggacaataa
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