Raoultella sp. X13: DSD31_02970
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Entry
DSD31_02970 CDS
T05540
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rao
Raoultella sp. X13
Pathway
rao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSD31_02970 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rao03019
]
DSD31_02970 (pnp)
03016 Transfer RNA biogenesis [BR:
rao03016
]
DSD31_02970 (pnp)
Enzymes [BR:
rao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DSD31_02970 (pnp)
Messenger RNA biogenesis [BR:
rao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DSD31_02970 (pnp)
Transfer RNA biogenesis [BR:
rao03016
]
Prokaryotic type
tRNA degradation factors
DSD31_02970 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
aRib
DUF2110
SLS1_KH2
DUF4172
Motif
Other DBs
NCBI-ProteinID:
AXC28492
UniProt:
A0A808Y770
LinkDB
All DBs
Position
597505..599640
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGSARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIQNINDLVKEAGKPRWDWQPEAVNE
ALNARVAALAEARLSDAYRITDKQERYAQIDVIKAETIATLIAEDETLDANELGEILHAI
EKNAVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPTTEE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAQHAIRRIEEITAEIEVGRVYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEAAEQTQPAAAPEAPVAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgctaaatccgatcgttcgtaaattccagtacggccaacataccgtaacgctggaaacc
ggcatgatggctcgtcaggccactgctgctgtcatggttagcatggatgacactgcggta
ttcgttaccgttgttggtcagaaaaaagcgaagccaggtcaggacttcttcccgctgact
gttaactatcaagagcgtacttacgcagcaggtaaaatcccgggtggtttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggcttcgtcaacgaagttcaggttatcgctaccgttgtttccgtt
aacccgcaggttaacccggatatcgtggcgatgattggtgcttccgcagcgctgtctctg
tcaggtattccgttcaacggtcctatcggttctgctcgcgttggttatatcaacgaccag
tacgttctgaacccgactcaggatgagctgaaagaaagtaagctggacctggtggttgcc
ggtaccgaagcggccgtgctgatggttgaatctgaagctgaactgctgagcgaagaccag
atgctgggtgcggtggtctttggccacgaacagcagcagattgtcattcagaacatcaac
gacctggttaaagaagcgggtaaaccgcgctgggactggcagcctgaagccgtcaacgaa
gcgctgaatgcgcgcgttgctgccctggccgaagcgcgtctgagcgatgcttaccgtatc
actgataaacaagagcgttacgctcagattgacgtgatcaaagcggaaactatcgcgact
ctgattgctgaagacgaaaccctggacgctaacgaactgggtgaaatcctgcacgctatc
gagaaaaatgccgtacgtagccgcgtactggcaggcgagccgcgtatcgatggccgtgaa
aaagatatgattcgtggtctggatgttcgtactggcgtactgccgcgtactcacggttcc
gcactgttcacccgtggcgaaactcaggcgctggtgactgcgaccctgggtaccgcacgt
gatgcgcagaacattgacgaactgatgggcgagcgtactgactccttcctgttccactac
aacttccctccgtactctgtcggtgagactggcatggtgggttcaccgaagcgtcgtgaa
atcggtcacggtcgtctggctaagcgcggcgtactggccgtgatgccgaccaccgaagaa
ttcccgtacaccgttcgcgtggtatctgaaatcaccgaatctaacggttcttcctccatg
gcttccgtgtgcggtgcttctctggcgctgatggatgctggtgtgccggtgaaggctgcc
gttgcgggtatcgcgatgggtctggtgaaagaaggcgacaactacgtcgttctgtctgac
attctgggtgacgaagaccacctcggtgatatggacttcaaagtggcgggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggcatcaccaaagagatcatgcag
gttgcactgaaccaggcgaaaggtgcacgtctgcacatcctgggcgtcatggagcaggcg
attaacgcgccgcgcggcgatatctctgaattcgcaccgcgtatccacaccatcaagatc
agcccggacaagatcaaagacgtgatcggtaaaggcggctctgtgattcgtgcgctgact
gaagagaccggtactaccatcgaaatcgaagatgacggtaccgtgaagatcgcagcaacc
gatggcgataaagcgcagcacgctatccgtcgtatcgaagagatcacggctgagatcgaa
gttggccgtgtttacaatggtaaagtgacccgcatcgttgactttggcgcatttgttgcc
atcggcggcggtaaagaaggtctggtccacatctctcagatcgctgacaagcgcgtagag
aaagtgaccgattacctgcagatgggtcaggaagtgccggttaaagttctggaagttgac
cgtcagggccgcgttcgtctgagcattaaagaagcagctgaacagactcagcctgccgct
gcaccggaagctccggttgctgagcaaggcgagtaa
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