Raoultella sp. X13: DSD31_04955
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Entry
DSD31_04955 CDS
T05540
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
rao
Raoultella sp. X13
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rao03016
]
DSD31_04955
Transfer RNA biogenesis [BR:
rao03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DSD31_04955
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiF
DAO
UDPG_MGDP_dh_N
Sacchrp_dh_NADP
NAD_binding_7
3HCDH_N
ELFV_dehydrog
TrkA_N
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AXC28863
UniProt:
A0A808XJJ5
LinkDB
All DBs
Position
1005372..1006190
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AA seq
272 aa
AA seq
DB search
MSVVISDAWRQRFGGTARLYGEKALQCFADAHVCVVGIGGVGSWAAEALARTGIGAITLI
DMDDVCVTNTNRQVHALGGNVGLAKAEVMAERIRLINPECRVTVVDDFVTPENVAEYLGI
GFSYVIDAIDSVRPKAALIAYCRRYKVPLVTTGGAGGQIDPTQIQVADLAKTIQDPLAAK
LRERLKSQFGVVKNSKGKLGVDCVFSTEALVYPQADGSVCAMKSTADGPKRMDCASGFGA
ATMVTATFGFVAVSHALKKMLAKAEREAASAG
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgtaatcagcgatgcctggcgtcaacgctttggcggcacggcgcgtttatat
ggtgaaaaagcgctgcaatgttttgccgacgcgcatgtttgcgtggtcggtatcggcggc
gtgggctcctgggcggcggaagcgctggcaagaaccgggattggcgcgattaccctgatt
gatatggatgatgtctgcgtcactaacactaaccgacaggttcatgccctggggggcaac
gtcgggctggcgaaagccgaggtgatggccgagcgtattcgtctgattaaccccgagtgt
cgggtgacggtcgtggacgattttgtcacgccggaaaacgtcgcggagtatctcggcatc
ggcttcagctatgtgatcgatgcgattgacagcgtacggcccaaggcggcgttaatcgcc
tactgtcgccgttataaggtgccgctggtgaccaccggcggcgcgggcgggcaaatcgac
ccgacgcagattcaggtagccgatctggcgaaaactattcaggatccgctggcggcaaag
ctgcgcgagcggttgaagagtcagttcggggtggtcaagaacagcaaaggtaagcttggc
gtggattgcgttttttccaccgaagcgctggtctatccgcaggccgacggcagcgtttgc
gcgatgaagagcaccgccgatggcccgaaacgaatggattgcgcctccggatttggcgca
gcgacgatggtcaccgcgaccttcggttttgtcgccgtgtcccatgcgctgaagaaaatg
ctggcgaaggcggagcgtgaggcggcttctgccgggtaa
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