Raoultella sp. X13: DSD31_16930
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Entry
DSD31_16930 CDS
T05540
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rao
Raoultella sp. X13
Pathway
rao00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DSD31_16930
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rao01007
]
DSD31_16930
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rao03016
]
DSD31_16930
Enzymes [BR:
rao01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
DSD31_16930
Amino acid related enzymes [BR:
rao01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
DSD31_16930
Transfer RNA biogenesis [BR:
rao03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DSD31_16930
Prokaryotic type
DSD31_16930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Filament
FAM184
Motif
Other DBs
NCBI-ProteinID:
AXC31034
UniProt:
A0A808XL68
LinkDB
All DBs
Position
complement(3561344..3562636)
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AA seq
430 aa
AA seq
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MLDPNLLRTEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVETENLQAERNSRSKSIGQ
AKARGEDIEPLRLEVNKLGEQLDAAKAELDVLLAEIRDIALTIPNIPHDDVPAGRDENDN
VEVSRWGTPREFDFDVRDHVTLGEMHGGLDFAAAVKLTGSRFVVMKGQLARLHRALAQFM
LDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTAEV
PLTNLVRDEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPED
SMAALEEMTGHAEKVLQLLGLPYRKVALCTGDMGFSACKTYDLEVWVPAQNTYREISSCS
NVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVALMENYQQADGRIEIPEILR
PYMRGLEFIG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcccaatctgctgcgtaccgagccagacgcagtcgctgaaaaactggcacgc
cggggctttaagctggatgtagataaactgcgcgctctggaagagcgtcgtaaagttctg
caggttgaaacagaaaacctgcaggcggagcgtaactcccgatcgaaatccattggccag
gcgaaagcgcgcggggaagatatcgagccattacgcctggaagtcaacaaactgggcgaa
cagctggatgcggcgaaagccgagctggacgtgttactggcagagatccgcgatatcgcg
ctgactatccctaatattccgcacgacgacgttccggccggtcgcgacgaaaacgacaac
gttgaagtcagccgctggggtacgccgcgcgagttcgattttgacgtccgcgatcacgtt
acgctgggcgaaatgcacggtgggctggactttgccgcagccgttaagctgaccggttcc
cgttttgtggtgatgaaagggcaactggcccgtctgcaccgtgcgctggcgcagttcatg
ctggatctgcataccgaacagcacggctacagtgaaaactatgtaccgtacctggtcaac
caggatacgctttacggtaccggtcagctgccgaaatttgccggcgatctgttccatacg
cgtccgctggaagaagaagccgacagcagcaactatgcgttgattccaactgcggaagta
ccgctgaccaacctcgttcgcgatgagatcattgacgaagacgatctgccgatcaaaatg
accgctcacacgccgtgtttccgttctgaagcgggctcctatggtcgtgatacccgtggt
ctgattcgtatgcatcagttcgacaaagtggaaatggtgcagatcgtgcgtccggaagat
tcgatggcggcgctggaagagatgaccggccatgcggaaaaagttctgcagttgctgggt
ctgccataccgcaaagtggcgctctgcaccggcgatatgggcttcagcgcatgcaaaacg
tatgatctggaagtctgggttccggcacagaacacctatcgtgaaatctcctcctgctct
aacgtctgggacttccaggcgcgtcgtatgcaggcacgctgccgcagcaagtccgacaag
aaaacccgtctggtgcatacgctgaacggctccgggctggcggtaggtcgtaccctggtt
gcgctgatggaaaactatcagcaggcggatggccgtatcgaaatcccggaaattctgcgc
ccctatatgcgtggcctcgaatttatcggctga
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