Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_0520
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Entry
Rahaq2_0520 CDS
T01770
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rahaq2_0520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
raq03019
]
Rahaq2_0520
03016 Transfer RNA biogenesis [BR:
raq03016
]
Rahaq2_0520
Enzymes [BR:
raq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Rahaq2_0520
Messenger RNA biogenesis [BR:
raq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Rahaq2_0520
Transfer RNA biogenesis [BR:
raq03016
]
Prokaryotic type
tRNA degradation factors
Rahaq2_0520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
aRib
KH_2
SLS1_KH2
DUF4172
DUF2110
Motif
Other DBs
NCBI-ProteinID:
AEX50450
UniProt:
H2ISY1
LinkDB
All DBs
Position
528126..530249
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AA seq
707 aa
AA seq
DB search
MLNPTIRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSL
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTADELKTSRLDLVVA
GTQGAVLMVESEAEVLSEDQMLGAVVFGHEQQQIVIDNINSLVAEVGKPKWDWQPEAVNA
ELHARVAALSESRLGDAYLITEKQERYNQINVIKADVVQALQAEDESLDAGEISDILGSI
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGEKTDNFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAMMPKPED
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGESFIVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISIPRGDISQFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATAPSQDETTEQPAAE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgactattcgtaaattccaatacggccagcacactgttacgctggaaacc
ggcatgatggctcgtcaggcaactgccgctgttatggttagcatggacgacactgcggta
ttcgttaccgttgttggccagaaaaaagctaaaccaggtcagagtttcttcccgctgact
gttaactatcaggagcgtacttacgctgctggtcgtatcccgggcagcttcttccgtcgc
gaaggccgtccaagtgaaggcgaaacactgacctcacgtctgattgaccgcccgattcgc
ccgctgttcccggactctttcctgaatgaagttcaggttatcgcgactgtggtttctctg
aatccacaagttaaccctgacatcgttgcgatgatcggtgcgtcggctgccctgagcctg
tctggtattccattcaatggcccgatcggcgctgcacgcgttggttatatcaacgaccaa
tatgttctgaacccaaccgcagatgagctgaaaacaagccgtctggacctggttgttgcc
ggtacgcagggcgcggttctgatggttgaatctgaagctgaagtgctgagcgaagatcaa
atgctgggcgcggtcgtattcggccacgaacaacaacaaatcgttatcgacaatatcaac
tcactggttgctgaagtcggtaagccaaaatgggactggcagccagaagcggttaacgct
gagctgcacgctcgcgttgccgcactgtctgaatcccgtctgggtgatgcgtacctgatc
accgagaagcaagaacgttacaaccagattaatgtcatcaaagctgatgttgttcaggct
ctgcaagctgaagacgaatccctggatgcgggcgaaatctctgacattctgggcagcatc
gagaaaaatgtggttcgtagccgtgtgctgcgtggcgagccgcgtattgatggtcgcgaa
aaagacatgatccgtggtctggatgtgcgtactggcgttctgccacgtacccatggttcc
gctctgttcacccgtggtgaaactcaggcgctggtgactgcaactctgggtactgcgcgt
gatgcacagaacctggatgagctgatgggcgagaaaacggacaacttcctgttccattac
aacttccctccatactcagtaggcgaaaccgggatggtgggttcgccaaaacgtcgtgag
attggccatggccgtcttgctaaacgtggtgtgctggcgatgatgccaaaaccagaagac
ttcccgtacaccgtacgtgtggtttctgaaatcactgaatccaacggttcatcttcaatg
gcttctgtttgtggcgcctctctggccctgatggatgcaggtgttccgattaaagccgct
gttgcgggtatcgcaatgggtctggttaaagaaggcgaaagctttatcgttctgtccgac
attctgggtgacgaagatcacctgggcgatatggactttaaagtggccggtagccgcgac
ggtatcaccgcgctgcagatggacatcaaaatcgaaggtatcacccgtgaaatcatgcag
gtggctctgaaccaggctaagggtgcgcgtctgcacattctgggcgtgatggaacaagct
atcagcattccacgtggcgacatctctcagtttgctccgcgtatccataccatcaagatc
agtccggacaaaatcaaggacgtgatcggtaaaggtggttctgtgatccgtgcgctgacc
gaagaaaccggcactactatcgaaatcgaagatgacggtactgtgaaaattgcagcaacc
gatggcgagaaagcgaaatacgctattcgtcgtatcgaagagatcactgctgaaatcgaa
gttggccgtatctatcaaggtaaagtgacccgtatcgtagactttggtgcctttgttgcc
atcggtggcggtaaagaaggtctggtacacatctctcaaatcgctgacaagcgtgtagag
aaagtgactgattacctgcagatgggccaggaagttccggttaaagttctcgaggttgac
cgtcagggtcgtgtgcgtctgagtatcaaagaagctaccgcaccttctcaggacgaaaca
actgagcaacctgcagcagaataa
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