KEGG   Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_0520
Entry
Rahaq2_0520       CDS       T01770                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
raq  Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:raq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Rahaq2_0520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:raq03019]
    Rahaq2_0520
   03016 Transfer RNA biogenesis [BR:raq03016]
    Rahaq2_0520
Enzymes [BR:raq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Rahaq2_0520
Messenger RNA biogenesis [BR:raq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Rahaq2_0520
Transfer RNA biogenesis [BR:raq03016]
 Prokaryotic type
  tRNA degradation factors
   Rahaq2_0520
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 S1_2 aRib KH_2 SLS1_KH2 DUF4172 DUF2110
Other DBs
NCBI-ProteinID: AEX50450
UniProt: H2ISY1
LinkDB
Position
528126..530249
AA seq 707 aa
MLNPTIRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSL
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTADELKTSRLDLVVA
GTQGAVLMVESEAEVLSEDQMLGAVVFGHEQQQIVIDNINSLVAEVGKPKWDWQPEAVNA
ELHARVAALSESRLGDAYLITEKQERYNQINVIKADVVQALQAEDESLDAGEISDILGSI
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGEKTDNFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAMMPKPED
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGESFIVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISIPRGDISQFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATAPSQDETTEQPAAE
NT seq 2124 nt   +upstreamnt  +downstreamnt
ttgcttaatccgactattcgtaaattccaatacggccagcacactgttacgctggaaacc
ggcatgatggctcgtcaggcaactgccgctgttatggttagcatggacgacactgcggta
ttcgttaccgttgttggccagaaaaaagctaaaccaggtcagagtttcttcccgctgact
gttaactatcaggagcgtacttacgctgctggtcgtatcccgggcagcttcttccgtcgc
gaaggccgtccaagtgaaggcgaaacactgacctcacgtctgattgaccgcccgattcgc
ccgctgttcccggactctttcctgaatgaagttcaggttatcgcgactgtggtttctctg
aatccacaagttaaccctgacatcgttgcgatgatcggtgcgtcggctgccctgagcctg
tctggtattccattcaatggcccgatcggcgctgcacgcgttggttatatcaacgaccaa
tatgttctgaacccaaccgcagatgagctgaaaacaagccgtctggacctggttgttgcc
ggtacgcagggcgcggttctgatggttgaatctgaagctgaagtgctgagcgaagatcaa
atgctgggcgcggtcgtattcggccacgaacaacaacaaatcgttatcgacaatatcaac
tcactggttgctgaagtcggtaagccaaaatgggactggcagccagaagcggttaacgct
gagctgcacgctcgcgttgccgcactgtctgaatcccgtctgggtgatgcgtacctgatc
accgagaagcaagaacgttacaaccagattaatgtcatcaaagctgatgttgttcaggct
ctgcaagctgaagacgaatccctggatgcgggcgaaatctctgacattctgggcagcatc
gagaaaaatgtggttcgtagccgtgtgctgcgtggcgagccgcgtattgatggtcgcgaa
aaagacatgatccgtggtctggatgtgcgtactggcgttctgccacgtacccatggttcc
gctctgttcacccgtggtgaaactcaggcgctggtgactgcaactctgggtactgcgcgt
gatgcacagaacctggatgagctgatgggcgagaaaacggacaacttcctgttccattac
aacttccctccatactcagtaggcgaaaccgggatggtgggttcgccaaaacgtcgtgag
attggccatggccgtcttgctaaacgtggtgtgctggcgatgatgccaaaaccagaagac
ttcccgtacaccgtacgtgtggtttctgaaatcactgaatccaacggttcatcttcaatg
gcttctgtttgtggcgcctctctggccctgatggatgcaggtgttccgattaaagccgct
gttgcgggtatcgcaatgggtctggttaaagaaggcgaaagctttatcgttctgtccgac
attctgggtgacgaagatcacctgggcgatatggactttaaagtggccggtagccgcgac
ggtatcaccgcgctgcagatggacatcaaaatcgaaggtatcacccgtgaaatcatgcag
gtggctctgaaccaggctaagggtgcgcgtctgcacattctgggcgtgatggaacaagct
atcagcattccacgtggcgacatctctcagtttgctccgcgtatccataccatcaagatc
agtccggacaaaatcaaggacgtgatcggtaaaggtggttctgtgatccgtgcgctgacc
gaagaaaccggcactactatcgaaatcgaagatgacggtactgtgaaaattgcagcaacc
gatggcgagaaagcgaaatacgctattcgtcgtatcgaagagatcactgctgaaatcgaa
gttggccgtatctatcaaggtaaagtgacccgtatcgtagactttggtgcctttgttgcc
atcggtggcggtaaagaaggtctggtacacatctctcaaatcgctgacaagcgtgtagag
aaagtgactgattacctgcagatgggccaggaagttccggttaaagttctcgaggttgac
cgtcagggtcgtgtgcgtctgagtatcaaagaagctaccgcaccttctcaggacgaaaca
actgagcaacctgcagcagaataa

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