Rahnella aquatilis CIP 78.65 = ATCC 33071: Rahaq2_0632
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Entry
Rahaq2_0632 CDS
T01770
Name
(GenBank) G:T/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
raq
Rahnella aquatilis CIP 78.65 = ATCC 33071
Pathway
raq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
raq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rahaq2_0632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
raq03400
]
Rahaq2_0632
Enzymes [BR:
raq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
Rahaq2_0632
DNA repair and recombination proteins [BR:
raq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rahaq2_0632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEX50558
UniProt:
H2IUG4
LinkDB
All DBs
Position
668170..668667
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AA seq
165 aa
AA seq
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MITDIIADDLLVVFCGINPGLSSAHKGYPFANGSNRFWKVIHQAGFTGRQLMPEQWQQLK
DFGCGITALVARPTVAASELMRDELREGGEVLKGKILRHQPRALAILGKQAFSKAFGVSK
VNWGRQALKIGDTEIWVLPNPSGLNRATLEELTASYRELYDALNS
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgattacagatattattgccgacgatcttttagttgtgttctgcggcatcaatcccggt
ctttcgtcagcccacaagggctatccttttgctaatggcagcaaccgtttctggaaggtc
atccatcaggcaggatttaccgggcgtcagttaatgccggaacagtggcagcagttaaag
gattttggttgcggtatcacggcgctggtggcgcgtccgacggtggcagccagtgagctg
atgcgcgatgaattgcgcgaaggcggcgaagtgttaaaagggaagatcctgcgccatcag
ccacgcgcgttagccattttaggcaaacaggcattcagtaaagcgtttggcgtcagcaag
gtgaactggggacgtcaggcgttgaaaatcggtgacacagagatctgggtgctgcctaat
cccagcggcctgaaccgtgcgacgttagaggaactgaccgcatcttaccgcgaactttac
gatgcgctgaattcttga
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