Riemerella anatipestifer CH3: M949_0290
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Entry
M949_0290 CDS
T03250
Name
(GenBank) site-specific recombinase gcr
Organism
rat
Riemerella anatipestifer CH3
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpecificRecomb
Peptidase_M3_N
Motif
Other DBs
NCBI-ProteinID:
AIH01461
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Position
286180..288210
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AA seq
676 aa
AA seq
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MNIFSNRPIESLESLITKYFKFQNETSALEPLSEIFEATKKEGFSHLLDILTQNEDLKNN
FAHYLKNIFRGKRMVLALTEANILSENSFFAEFKKRVIAKVLPAVEDEDTVSFVIEKILL
SSKTNFDFLLNLSKEEKNTFLQIMGFESLFAQKVVQEDLFLSINILAWRAIGNALDVEVL
KMAPEYKNFDNPFIALQNEIDRLLELFQETSEVKISTKNEHYKQAKVYLNQCLDFIKIAF
KNTSKYGLSSKTNQSLMKIRQQLVRISEILPLLVTEDKTTHLEQSKTLVENILRYKSHRN
NFSELFADSTLQLSHLITTHTAQAGTHYIAFNYKQYMDMFKKAAGGGIIVGFLCVLKMLY
SYSNGSEFTHAFLYSFNYAMGFVLIYLLHYTLATKQPAMTAATMAKVLSEDKNTSKNYTD
FADLVSKLFRTQFIAFVGNVLLAFPVALLIIYGLDIIFQQNLAADKANKLLRDLNPVESK
AILHASIAGVFLFISGIISGNISNNSRFYQIPQRIIKNPYLNKAFGAKAARSISAFYSKN
WAGVVSNFWFGVFLGATAPIGNFLGLDLDIRHITFAAGNLALAIYGKGFDIDMGTFWISF
ITVFLIGFFNFIVSFGLSMSLAFRSRKVKFGEVGLIYREIFNTFVKNPAKFFIPLPSGVN
TNAEKMVVELEKEGKN
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatttagtaatcgtcctatagaatcactagaatctctcattacaaaatatttt
aaatttcagaacgaaacctctgcactagaacctttgtctgaaatattcgaagctactaaa
aaggaaggcttcagccatttattagatatactcacccaaaatgaagatttaaagaataat
tttgctcattatctaaaaaatattttccgaggaaaacgaatggttctggctcttacagag
gctaatattttatccgaaaattctttctttgcagagtttaaaaagagagtaattgcgaaa
gtactcccagcagtagaagatgaagacacagtttctttcgttatagaaaaaatattactt
agctctaaaaccaattttgattttctgcttaacctctccaaagaagaaaaaaatactttt
ctacaaattatggggtttgagagcctttttgcacaaaaggtcgttcaagaagatttattt
ttatccatcaacattttagcctggagagccatagggaatgccctagatgtagaagtactt
aaaatggctccagaatataaaaattttgacaacccttttattgccctacaaaatgaaatt
gaccgcctactagagttatttcaagaaacttcagaagttaaaatttctactaaaaacgaa
cattataaacaagctaaagtttaccttaaccaatgtttagatttcattaaaatagcattt
aaaaacacctctaaatacgggctatctagcaagaccaaccagtctttaatgaaaattaga
caacagctggtaagaatttcggaaatattaccgctactggttacagaggacaagactact
catcttgaacagtctaaaactttagtagaaaacattctaaggtacaaatctcacagaaac
aatttcagcgaactatttgcggatagcaccttacaactttctcacctcattactacccat
accgcacaagcagggactcattatatcgctttcaattataagcagtatatggatatgttt
aaaaaagcggccggaggtggtatcatcgtaggatttttatgtgtactcaagatgctttat
agctacagtaatggtagtgaatttacccacgcatttttgtactcgttcaactatgctatg
ggctttgtactcatctatctcttgcactacactttggcgactaaacaacctgctatgaca
gcagctactatggcgaaagtattatccgaagataaaaacacttctaaaaactacactgat
tttgcagatttagtatcaaaattattcagaacgcaatttattgcatttgtaggcaatgta
ttgcttgccttcccagtagctctacttattatctatggattggatattatcttccaacaa
aaccttgccgcagataaagctaataaacttttgagggacttaaaccctgtagaatccaag
gctatactacacgctagtatagctggggtatttttatttatttcagggattatatctgga
aatatcagcaacaactctaggttttaccaaattcctcaacgaataattaaaaatccttac
cttaacaaagcctttggagcaaaagctgcccgaagcatttctgcattttattctaaaaac
tgggcgggtgtcgtttctaacttttggttcggagtattcttaggtgccacagctcctatt
ggtaactttttaggattagatttagacattagacacattacctttgccgctggcaacctc
gctttagccatatacggaaaagggttcgatattgatatgggaactttttggattagtttc
attacagtatttctaatcggatttttcaactttatcgtaagttttgggctatcaatgtcg
ttagcgttccgttctagaaaggttaaatttggagaagtagggttaatctacagagaaatt
tttaacacctttgttaaaaatccagctaaatttttcattccattaccttctggtgtaaat
accaatgctgaaaaaatggtagtagaactagaaaaagaggggaaaaactaa
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