Rhodopirellula baltica: RB6767
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Entry
RB6767 CDS
T00134
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rba
Rhodopirellula baltica
Pathway
rba03420
Nucleotide excision repair
rba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RB6767 (pcrA)
03430 Mismatch repair
RB6767 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rba03400
]
RB6767 (pcrA)
Enzymes [BR:
rba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RB6767 (pcrA)
DNA repair and recombination proteins [BR:
rba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RB6767 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
RB6767 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
CAD74995
UniProt:
Q7UPR6
LinkDB
All DBs
Position
complement(3597576..3599591)
Genome browser
AA seq
671 aa
AA seq
DB search
MSTFDVAGLNPPQAKAVQTLSGPLLVLAGAGTGKTRVVTFRIANLIKHGVKPDRILAVTF
TNKAAGEMQDRVGELLGYKNQKRKRGQKAPPKPTISTFHAQCVRILREHAPAIGFPATFA
IYDRSDQESLARAILRELRLPNTALKPGDMLSIISGWKSASVFPEQAMSIASTDKEHFAA
SGYRRYQNGLRARGAMDFDDLLLHTETLFAEHTDIRDREAGKYDHVLVDEYQDTNGSQYR
ITKHLTEVHRNLCVVGDDDQSIYAWRGADVSHILSFSKDWPDAEVVWLEDNYRSTGAILE
MANTLIDFNTVRHDKVLKPFRPSGKRPRIVQHKDEQAEAETVVREIKHLIENEHIQPKDI
AILFRTNEQPRLFETELRKHDVPYVMLGSQSFFDRREVRDIVAYLKWINQPDDEISLLRV
INTPARGLSNKSVRMLVDRAVSKGIPVWQVMNDPESVADLTPAALRGIDQLKQLLGDVQQ
RLANETMREGLETLLQRTAYADEIARLYDQPDERESRMASIGEVANAVAAYEDKNEEPDL
SGFLSDIALAGREMGSEKDKLAMKNAVWLLTMHAAKGLEFPVVYMVGMEDGILPHSRTLK
GGMDEDIAEERRLCYVGITRAQDQLTMSLALTRRKWGKPRPTKPSMFLYEITGQADNPNK
YRKRKQGASRS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacgtttgatgttgcgggtctgaatccgccacaagccaaagcggtgcagacattg
tctggcccgcttctggtgctcgccggtgctggcacgggaaaaacccgcgtcgtgacgttt
cgcattgcgaacctgatcaagcacggcgtgaagcctgatcgtattttggcggtgacgttc
accaacaaagcggctggtgaaatgcaggatcgcgtcggcgaactgctgggctacaaaaat
caaaagcggaaacgtggccaaaaggccccgccaaagcccacgatcagcacgtttcacgct
cagtgcgtgaggatcctccgcgagcatgcgcccgcgattggttttcccgcgaccttcgca
atttacgaccgcagtgaccaagagtcgctggcgcgtgcgattctgcgtgagcttcgtttg
ccgaacacggcattgaaacccggtgacatgctttcaatcatcagcggttggaagagcgct
tcggtgtttccagaacaagcgatgagcatcgccagcaccgacaaagagcattttgccgcg
tcgggttaccgccgatatcaaaatggattgcgtgctcgcggggcgatggattttgatgac
ttgctgctgcacaccgagacgttgttcgctgagcacacggacattcgcgaccgcgaagcg
ggcaagtacgaccatgtgttggttgacgaatatcaagacaccaacggcagccagtaccgg
atcaccaaacacctgacggaggtgcatcggaacctttgtgtcgtcggcgacgatgaccag
tcgatctatgcatggcgtggtgcggacgtgtcgcacattctcagcttcagcaaggattgg
ccggatgcggaagtggtttggttggaagacaactatcgcagcaccggtgcgatcttggag
atggccaatacgttgattgatttcaacacagtccgtcacgacaaagtgctcaagccgttt
cgcccatcaggcaagcgtcctcggattgtgcagcacaaagatgaacaagctgaggccgaa
acggtcgttcgtgaaatcaaacacctgatagaaaacgaacacatccagcccaaggatatc
gccatcctatttcgcaccaacgaacagcctcgtttgttcgagacggaattgcgaaagcat
gatgtgccgtatgtgatgttgggtagccagtcattttttgaccggcgtgaagtccgtgac
attgtcgcgtatttgaagtggatcaatcagcccgacgatgagatctcgttgcttcgtgtg
atcaacacgcccgctcgaggactgagtaacaagtccgtgcggatgcttgttgatcgcgcc
gtgtcgaaggggatccccgtttggcaggtcatgaacgatcccgaatccgtcgcggacctg
acccctgccgctcttcggggaattgatcagctgaagcaattgctgggcgatgtgcagcaa
cggttggcaaacgaaacgatgcgagaaggtttggaaacgctgttgcagcggaccgcctac
gcggatgagatcgctcggctgtatgaccagcctgatgagcgcgaatcgcgaatggcatcg
attggcgaagttgccaacgcggtcgccgcatacgaggataagaatgaagagccggatctg
tcggggttcttgtccgacattgcgctggccggtcgagaaatgggcagcgaaaaagataag
ttggcgatgaagaacgcggtgtggttgttgaccatgcacgcagccaaaggattggagttc
ccggtcgtttacatggtcgggatggaagatggcatcttgccgcacagtcgaacgttgaaa
ggtgggatggacgaagacatcgccgaagagcggcgtttgtgttacgtcggcatcacccgt
gctcaggaccaattgacgatgtcgctggcgttgacgcgtcgcaaatggggcaagcctcgc
ccaaccaagccgagcatgttcctgtacgagatcaccggacaggccgataatccgaacaag
tatcgcaagcggaagcagggcgcatcacgttcttaa
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