Rhodopirellula baltica: RB7564
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Entry
RB7564 CDS
T00134
Symbol
cefD
Name
(GenBank) isopenicillin N-epimerase
KO
K04127
isopenicillin-N epimerase [EC:
5.1.1.17
]
Organism
rba
Rhodopirellula baltica
Pathway
rba01100
Metabolic pathways
rba01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rba00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00311 Penicillin and cephalosporin biosynthesis
RB7564 (cefD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
rba01008
]
RB7564 (cefD)
Enzymes [BR:
rba01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.17 isopenicillin-N epimerase
RB7564 (cefD)
Polyketide biosynthesis proteins [BR:
rba01008
]
Nonribosomal peptide tailoring proteins
Others
RB7564 (cefD)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CAD75434
UniProt:
Q7UNI5
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All DBs
Position
4063124..4064311
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AA seq
395 aa
AA seq
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MNDTQREPWLIRSDLDFLNHGSFGATPRCVIENQRHWQNLLEEDPIEFLAPERSLLPKLD
FVRETVAKEINASSRDVVFVRNATEGVNAVVRSLPLRAGDEILVTNHGYNACINAVSQAA
NIAGAAVTTANIPFPIQSPDEVVRAIERRISPKTTWMLIDHVTSPTGIVLPVAQLIELAH
SNNIRVMVDGAHAPGMLPLNLNELKPDYYTANHHKWWCGPKVSGFLYVDEESQDEVLPSI
ISHGANMEGYGPSKFQSQFNWPGTFDPSPLLALPTAIDFLAGLHPADGPNRLAGLLRHNH
ELAVEGRRVILNELKLAEPAPESMLGSLATIPVPAWTNHTSVQIQAVRTALRTEYRFELP
VFRFDATNVCLRISAQTYNSLDQYERLADAVTKLS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgacacacaacgcgaaccatggttgattcgaagcgacctcgatttcctcaaccac
ggatccttcggcgccacacctcgatgtgtgatcgaaaaccaacgccattggcaaaacctt
ctggaagaggatccgatcgagttcctcgcacctgaaagatcgctactacccaaactcgac
ttcgttcgcgaaacggttgccaaagaaatcaatgcgtcgtcgcgagatgttgtttttgtt
cgcaatgccaccgaaggtgtcaacgcggtggtgcggtcgctaccgctgcgagccggcgac
gaaatactcgtcaccaaccatggttacaacgcctgcatcaatgcggtttcccaagccgcg
aatattgctggtgcagcggtaacgaccgccaacattccctttccaattcaaagccccgac
gaagtcgtgcgggcgatcgagcgtaggatttcgccgaagaccacatggatgctgattgac
catgtgaccagtcccacaggaattgtcttgccggttgctcagttgattgaactggcccat
tccaacaacattcgcgtgatggtcgatggtgctcacgcacccggcatgctgccattgaat
ctcaacgaactgaagcctgactactacaccgcgaatcatcacaaatggtggtgcggaccc
aaggtatccggatttctttacgtcgatgaagaatctcaagacgaagtccttccatcaatc
atcagccacggtgcgaacatggaaggctatggcccaagcaagttccaaagccaattcaac
tggccgggaacctttgatccttctcccctgttagcattgccaaccgcgattgatttcctg
gcaggcttgcacccggccgatggtcccaatcgattggcgggactgttgcgacacaaccat
gaactggctgtcgaaggtcggcgtgtgatcctcaacgaactcaaactcgccgaacccgca
ccagaatcgatgttgggcagcctcgccaccattcccgttccagcgtggacgaatcacacc
tcagtacagatacaagctgtccgaaccgctttgcgaaccgaatatcggttcgagcttccc
gtgtttcggttcgatgcaaccaacgtctgtttgcgaatctcggcacaaacctacaactcg
ctggatcaatacgaacggttggccgacgcagtcaccaaactttcgtga
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