Rhinopithecus bieti (black snub-nosed monkey): 108514953 Help Entry 108514953         CDS       T04641                                  Gene name TRAF3 Definition (RefSeq) TNF receptor associated factor 3   KO K03174   TNF receptor-associated factor 3 Organism rbb  Rhinopithecus bieti (black snub-nosed monkey) Pathway rbb04064   NF-kappa B signaling pathway rbb04620   Toll-like receptor signaling pathway rbb04621   NOD-like receptor signaling pathway rbb04622   RIG-I-like receptor signaling pathway rbb04657   IL-17 signaling pathway rbb04668   TNF signaling pathway rbb05160   Hepatitis C rbb05161   Hepatitis B rbb05162   Measles rbb05164   Influenza A rbb05165   Human papillomavirus infection rbb05167   Kaposi sarcoma-associated herpesvirus infection rbb05168   Herpes simplex virus 1 infection rbb05169   Epstein-Barr virus infection rbb05171   Coronavirus disease - COVID-19 rbb05200   Pathways in cancer rbb05203   Viral carcinogenesis rbb05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:rbb00001]  09130 Environmental Information Processing   09132 Signal transduction    04064 NF-kappa B signaling pathway     108514953 (TRAF3)    04668 TNF signaling pathway     108514953 (TRAF3)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     108514953 (TRAF3)    04621 NOD-like receptor signaling pathway     108514953 (TRAF3)    04622 RIG-I-like receptor signaling pathway     108514953 (TRAF3)    04657 IL-17 signaling pathway     108514953 (TRAF3)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     108514953 (TRAF3)    05203 Viral carcinogenesis     108514953 (TRAF3)   09162 Cancer: specific types    05222 Small cell lung cancer     108514953 (TRAF3)   09172 Infectious disease: viral    05161 Hepatitis B     108514953 (TRAF3)    05160 Hepatitis C     108514953 (TRAF3)    05171 Coronavirus disease - COVID-19     108514953 (TRAF3)    05164 Influenza A     108514953 (TRAF3)    05162 Measles     108514953 (TRAF3)    05168 Herpes simplex virus 1 infection     108514953 (TRAF3)    05167 Kaposi sarcoma-associated herpesvirus infection     108514953 (TRAF3)    05169 Epstein-Barr virus infection     108514953 (TRAF3)    05165 Human papillomavirus infection     108514953 (TRAF3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  zf-TRAF zf-C3HC4 ATG16 Crescentin Sina zf-C3HC4_2 Tropomyosin_1 MPS2 Spc7 Spc29 zf-RING_4 Cast zf-C3HC4_3 T3SSipB KxDL FliJ zf-RING_UBOX BLOC1_2 Fib_alpha DUF1664 DUF3450 SPATA24 GAS V_ATPase_I Motif Other DBs NCBI-GeneID:  108514953 NCBI-ProteinID:  XP_017706983 LinkDB All DBs Position Un AA seq 538 aa AA seqDB search MTHRSAWLLHGIQKTKTREARFYTTIWKHLIYALELLLFPKMESSKKMDSPGSLQTNPPL KLHTDRSAGMPIFAPEQGGYKEKFVKTVEDKYKCEKCRLVLCSPKQTECGHRFCESCMAA LLSSSSPKCTACQESIVKDKVFFLLTCEDQGDKDLTLWESKHEDTDCPCVVVSCPHKCSV QALLRSELSAHLSECVNAPSTCSFKRYGCVFQGTNQQIKAHEASSAVQHVNLLKEWSNSL EKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKL KELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQ MLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYF GYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGD AFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSDLPDP NT seq 1617 nt NT seq  +upstreamnt  +downstreamnt atgacacacagaagtgcatggctattgcatggtatccagaaaacaaagaccagagaagcc agattttataccaccatctggaaacatttaatttatgctttagaactcctcctctttcct aaaatggagtcgagtaaaaagatggactcccctggctcgctgcagactaacccgccgcta aagctgcacactgaccgcagtgctgggatgccgatttttgcccccgaacaaggaggttac aaggaaaagtttgtgaagaccgtggaggacaagtacaagtgtgagaagtgtcgcctggtg ctgtgcagcccgaagcagactgaatgtgggcaccgcttctgcgagagctgcatggccgcc ctgctgagctcttcaagtccaaaatgtacagcgtgtcaagagagcatcgttaaagataag gtattctttctgttaacttgtgaagatcagggtgataaagatctcaccctatgggagagt aaacatgaggacaccgactgtccctgcgtggtggtatcctgccctcacaaatgcagcgtc caggctctcctgaggagcgagttgagtgcacacttgtcagagtgtgtcaatgcccccagc acctgtagttttaagcgctatggctgcgtttttcaggggacaaaccagcagatcaaggcc cacgaggccagctccgccgtgcagcacgtcaacctgctgaaggagtggagcaactcgctc gaaaagaaggtttccttgttgcagaatgaaagtgtagaaaaaaacaagagcatacaaagt ttgcacaatcagatatgtagctttgaaattgaaattgagagacaaaaggaaatgcttcga aataatgaatccaaaatccttcatttacagcgagtgatagacagccaagcagagaaactg aaggagctcgacaaggagatccggcccttccggcagaactgggaggaagcagacagcatg aagagcagcgtggagtccctccagaaccgcgtgaccgagctggagagcgtggacaagagc gcggggcaagtggctcggaacacaggcctgctggagtcccagctgagccggcatgaccag atgctgagtgtgcacgacatccgcctggccgacatggacctccgcttccaggtcctggag accgccagctacaacggcgtgctcatctggaagattcgtgactacaagcggcggaagcag gaggctgtcatggggaagaccctgtccctttacagccagcctttctacactggctacttt ggctataagatgtgtgccagggtctacctgaatggggacgggatgggaaaggggacgcac ctgtcgctgttttttgtcatcatgcgtggagaatatgatgccctgcttccttggccattt aagcagaaagtgacactcatgctgatggatcaggggtcctctcggcggcatttgggagat gcgttcaagcccgaccccaacagcagcagcttcaagaagcccactggagagatgaatatt gcctctggctgcccagtctttgtggcccagactgttctagaaaatgggacatatattaaa gatgatacaatttttattaaagtcatagtggatacttcggatctgcccgatccctga

Rhinopithecus bieti (black snub-nosed monkey): 108515877 Help Entry 108515877         CDS       T04641                                  Gene name TRAF5 Definition (RefSeq) TNF receptor associated factor 5   KO K09849   TNF receptor-associated factor 5 Organism rbb  Rhinopithecus bieti (black snub-nosed monkey) Pathway rbb04064   NF-kappa B signaling pathway rbb04217   Necroptosis rbb04621   NOD-like receptor signaling pathway rbb04657   IL-17 signaling pathway rbb04668   TNF signaling pathway rbb05163   Human cytomegalovirus infection rbb05168   Herpes simplex virus 1 infection rbb05169   Epstein-Barr virus infection rbb05170   Human immunodeficiency virus 1 infection rbb05200   Pathways in cancer rbb05203   Viral carcinogenesis rbb05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:rbb00001]  09130 Environmental Information Processing   09132 Signal transduction    04064 NF-kappa B signaling pathway     108515877 (TRAF5)    04668 TNF signaling pathway     108515877 (TRAF5)  09140 Cellular Processes   09143 Cell growth and death    04217 Necroptosis     108515877 (TRAF5)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     108515877 (TRAF5)    04657 IL-17 signaling pathway     108515877 (TRAF5)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     108515877 (TRAF5)    05203 Viral carcinogenesis     108515877 (TRAF5)   09162 Cancer: specific types    05222 Small cell lung cancer     108515877 (TRAF5)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     108515877 (TRAF5)    05168 Herpes simplex virus 1 infection     108515877 (TRAF5)    05163 Human cytomegalovirus infection     108515877 (TRAF5)    05169 Epstein-Barr virus infection     108515877 (TRAF5)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:rbb04121]     108515877 (TRAF5) Ubiquitin system [BR:rbb04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     108515877 (TRAF5) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  zf-TRAF zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 zf-TRAF_2 zf-RING_UBOX zf-RING_2 zf-RING_6 zf-ACC ATG16 Sina BORCS8 Mt_ATP_synt DUF4941 Spc29 Acetyltransf_11 Syntaxin-6_N PHM7_cyt DUF4279 MCPsignal Motif Other DBs NCBI-GeneID:  108515877 NCBI-ProteinID:  XP_017708545 UniProt:  A0A2K6KEA2 LinkDB All DBs Position Un AA seq 557 aa AA seqDB search MAYSEEHRGMPCGFIRQNSGNSISLDFEPNIEYQFVERLEERYKCAFCRSVLHNPHQTGC GHRFCQHCILSLRELNTVPICPVDKEVIKSQEVFKDNCCKREVLNLYVYCSNAPGCNAKV ILGRYQDHLQQCLFQAVQCSNENCREPVLRKDLKEHLSAYCQFREEKCLYCKKDVVVINL QNHEENLCPEYPVFCPNNCAKIILKTEVDEHLAVCPEAEQDCPFKHYGCAVTDKRRNLQE HEHSALREHMRLVLEKNVQLEEQISDLHKSLEQKESKIQQLAETIKKLEKEFKQFAQLFG KNGSFLPNIQVFASHIDKSAWLEAQVHQLLQMVNQQQNKSDLRPLMEAVDTVKQKITLLE NNDQRLAVLEEETNKHDTHINIHKAQLNKNEERFKLLEGTCYNGKLIWKVTDYKMKKREA VDGHTVSIFSQSFYTGRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQ RVTLMLLDQSGKKNIMETFKPDPNSSSFKRPDGEMNIASGCPRFVAHSVLENAKNAYIKD DTLFLKVAVDLTDLEDL NT seq 1674 nt NT seq  +upstreamnt  +downstreamnt atggcttattcagaagagcatagaggtatgccctgtgggttcatccgtcagaattccggc aactccatttccttggactttgagcccaatatagagtaccagtttgtggagcggttggaa gagcgctacaaatgtgccttctgccgctcggtgcttcacaacccccaccagacaggatgt gggcaccgcttctgccagcactgcatcctgtccctgagagaattaaacacagtgccaatc tgccctgtagacaaggaggtcatcaaatctcaggaggtttttaaagacaattgctgcaaa agagaagtcctcaacttatatgtatattgcagcaatgctcctggatgtaacgccaaggtt attctgggccggtaccaggatcaccttcagcagtgcttatttcaagctgtgcagtgttct aatgagaactgccgggaaccagtcctacggaaagacctgaaagagcatttgagtgcatac tgtcagtttcgagaggaaaaatgcctttattgcaaaaaggatgtggtagtcatcaatcta cagaatcatgaggaaaacttgtgtcctgaatacccagtattttgtcccaacaattgtgcg aagattattctaaaaactgaggtggatgaacacctggctgtatgtcccgaagctgagcaa gactgtccttttaagcactatggctgtgctgtaacggataaacggaggaacctgcaggaa catgagcattcagccttacgggagcacatgcgtctggttttagaaaagaacgtccaatta gaagaacagatttctgacttacacaagagcctagaacagaaagaaagtaaaatccagcag ctagcagaaactataaagaaacttgaaaaggagttcaagcagtttgcacagttgtttggc aaaaatggaagcttcctcccaaacatccaggtttttgccagtcacattgacaagtcagct tggctagaagctcaagtgcatcaattattacaaatggttaaccagcaacaaaataaatct gacctgaggcctttgatggaagcagttgatacagtgaaacagaaaattaccctgctagaa aacaatgatcaaagattagctgttttagaagaggaaactaacaaacatgatacccacatt aatattcataaagcacagctgaataaaaatgaagagcgatttaaactactggagggtact tgctataatggaaagctcatttggaaggtgacagattacaagatgaagaagagggaggca gtggatgggcacacagtgtccatcttcagccagtccttctacaccggccgctgtggctac cggctgtgtgctagagcatacctgaatggggatgggtctgggaaggggacacacctgtcc ctatactttgtggtcatgcgaggagagtttgactcactgttgcagtggccattcaggcag agggtgacactgatgcttctggaccagagtggcaaaaaaaacattatggagaccttcaag cctgaccccaatagcagcagctttaaaagacctgatggggagatgaacattgcatctggc tgtccccgctttgtggctcattctgttttggagaatgccaagaacgcctacattaaagat gacactctgttcttgaaagtggctgtggacttaactgacctggaggatctctaa

Rhinopithecus bieti (black snub-nosed monkey): 108530161 Help Entry 108530161         CDS       T04641                                  Definition (RefSeq) TNF receptor-associated factor 4-like   KO K09848   TNF receptor-associated factor 4 Organism rbb  Rhinopithecus bieti (black snub-nosed monkey) Pathway rbb04657   IL-17 signaling pathway rbb05200   Pathways in cancer rbb05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:rbb00001]  09150 Organismal Systems   09151 Immune system    04657 IL-17 signaling pathway     108530161  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     108530161   09162 Cancer: specific types    05222 Small cell lung cancer     108530161 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  zf-TRAF Bunya_NS-S Motif Other DBs NCBI-GeneID:  108530161 NCBI-ProteinID:  XP_017728350 LinkDB All DBs Position Un AA seq 446 aa AA seqDB search MRKCLLEGDAKGNPISLVIGTCNLSGAQDGYIRVTANMQREREHTSFSVGTVAQEDLPGH LKDSCSSALVLCSFKDSSCKHRCPKWAMAQHVEESVKLHLAMMCALLSWQWQEQQDLQQE LEELSVGSDGVLIWKTGSYGRVGTVAQEDLPGHLKDSCSSALVLCSFKDSSCKHRCPKWA MAQHVEESVKLHLAMMCALLSWQWQEQQDLQQELEELSVGSDGVLIWKTGSYGRQLQEAK AKPNLECFSPAFYTHKCGYKLQVSAFLNGKGSGEGTRLSLYVDLLPGAFDNLLEWSFARR VTFCLLDQSDSGLAKPQQVTETFHPGPNWKHFQKPGTWGGSLDESSLGFGYPKFISHQDI QKRKTMCSVGNRSWDHQGLKTSDRRDCLPSWFCRAAWGIPGECRIGEPIHDPSLWPSGKF TCLQNDASTLPLRCGFSSYKATFRSA NT seq 1341 nt NT seq  +upstreamnt  +downstreamnt atgaggaagtgcctcttagagggggatgctaagggcaaccccatttctctggttataggg acctgcaacctcagtggggcccaagatgggtacattcgggtcaccgccaacatgcagaga gagagagaacatacatctttttctgtgggcactgtggctcaggaggacctgccaggccat ctgaaggacagctgtagcagcgccctggtgctatgctcattcaaagactccagctgcaag cacaggtgccctaagtgggcaatggcacagcatgtggaggagagtgtgaagctacatcta gccatgatgtgtgctctgttgagctggcaatggcaggagcagcaggaccttcagcaagag ctggaggagctatcagtgggcagtgatggtgtgcttatctggaagactggcagttatggt cgtgtgggcactgtggctcaggaggacctgccaggccatctgaaggacagctgtagcagc gccctggtgctatgctcattcaaagactccagctgcaagcacaggtgccctaagtgggca atggcacagcatgtggaggagagtgtgaagctacatctagccatgatgtgtgctctgttg agctggcaatggcaggagcagcaggaccttcagcaagagctggaggagctatcagtgggc agtgatggtgtgcttatctggaagactggcagttatggtcggcagctacaggaggccaag gccaagcccaaccttgagtgcttcagcccagccttctacacacataagtgtggttacaag ctgcaggtgtctgcattcctcaatggcaaaggcagtggtgagggcacacgcctctcactg tacgttgacttgctgcctggtgcctttgacaatctccttgagtggtcctttgcccgccgt gtcaccttctgcctgctggatcagagcgactctgggctggctaaaccacagcaggtcact gagaccttccacccaggcccaaactggaagcatttccagaagccgggcacctgggggggc tccctggatgagagttctttgggctttggttatcccaagttcatctcccaccaggacatc caaaagcgaaaaactatgtgcagtgtggggaacaggtcttgggatcatcaagggctgaaa acaagtgaccgcagggactgtctcccttcttggttctgcagggcggcctggggcatccct ggggagtgccgcataggcgagcctatccatgatccttcactctggccttctggaaagttc acctgccttcagaatgatgcctcaactcttcctctgcgatgtggtttctcttcctacaaa gcaacattcaggagcgcctaa

Rhinopithecus bieti (black snub-nosed monkey): 108535559 Help Entry 108535559         CDS       T04641                                  Gene name TRAF6 Definition (RefSeq) TNF receptor associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism rbb  Rhinopithecus bieti (black snub-nosed monkey) Pathway rbb04010   MAPK signaling pathway rbb04064   NF-kappa B signaling pathway rbb04120   Ubiquitin mediated proteolysis rbb04140   Autophagy - animal rbb04144   Endocytosis rbb04380   Osteoclast differentiation rbb04620   Toll-like receptor signaling pathway rbb04621   NOD-like receptor signaling pathway rbb04622   RIG-I-like receptor signaling pathway rbb04657   IL-17 signaling pathway rbb04722   Neurotrophin signaling pathway rbb05132   Salmonella infection rbb05133   Pertussis rbb05135   Yersinia infection rbb05140   Leishmaniasis rbb05142   Chagas disease rbb05145   Toxoplasmosis rbb05152   Tuberculosis rbb05160   Hepatitis C rbb05161   Hepatitis B rbb05162   Measles rbb05168   Herpes simplex virus 1 infection rbb05169   Epstein-Barr virus infection rbb05170   Human immunodeficiency virus 1 infection rbb05171   Coronavirus disease - COVID-19 rbb05200   Pathways in cancer rbb05222   Small cell lung cancer rbb05235   PD-L1 expression and PD-1 checkpoint pathway in cancer Brite KEGG Orthology (KO) [BR:rbb00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     108535559 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     108535559 (TRAF6)    04064 NF-kappa B signaling pathway     108535559 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     108535559 (TRAF6)    04140 Autophagy - animal     108535559 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     108535559 (TRAF6)    04621 NOD-like receptor signaling pathway     108535559 (TRAF6)    04622 RIG-I-like receptor signaling pathway     108535559 (TRAF6)    04657 IL-17 signaling pathway     108535559 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     108535559 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     108535559 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     108535559 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     108535559 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     108535559 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     108535559 (TRAF6)    05135 Yersinia infection     108535559 (TRAF6)    05133 Pertussis     108535559 (TRAF6)    05152 Tuberculosis     108535559 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     108535559 (TRAF6)    05161 Hepatitis B     108535559 (TRAF6)    05160 Hepatitis C     108535559 (TRAF6)    05171 Coronavirus disease - COVID-19     108535559 (TRAF6)    05162 Measles     108535559 (TRAF6)    05168 Herpes simplex virus 1 infection     108535559 (TRAF6)    05169 Epstein-Barr virus infection     108535559 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     108535559 (TRAF6)    05140 Leishmaniasis     108535559 (TRAF6)    05142 Chagas disease     108535559 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:rbb04131]     108535559 (TRAF6)    04121 Ubiquitin system [BR:rbb04121]     108535559 (TRAF6) Enzymes [BR:rbb01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      108535559 (TRAF6) Membrane trafficking [BR:rbb04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     108535559 (TRAF6) Ubiquitin system [BR:rbb04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     108535559 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_2 zf-RING_UBOX zf-C3HC4_4 zf-TRAF_2 zf-RING_5 SlyX Spc29 zf-RING_11 U-box Tropomyosin_1 DUF16 PspA_IM30 EzrA AAA_13 ADIP FliJ UPF0242 DM DUF3450 TMF_DNA_bd CENP-F_leu_zip Filament Spc7 DUF1664 DivIC Motif Other DBs NCBI-GeneID:  108535559 NCBI-ProteinID:  XP_017737118 UniProt:  A0A2K6MKD5 LinkDB All DBs Position Un AA seq 522 aa AA seqDB search MSLLNCENSCGSSQSESDCCVAMASSCSAATKDDSVSGTASTGNLSSSFMEEIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLMVKCPHEGCLHKMELRHLEDHQAHCEFALVDCPQCQRPFQKFHINIHILK DCPRRQVSCDNCAASVAFEDKEIHDQNCPLANVICEYCNTILIREQMPNHYDLDCPTAPI PCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVHSLSLIPDSGYVSEVRNFQETIH QLEGRLVRQDHQIRELTAKMETQSTYVSELKRTIRTLEDKVAEIEAQQCNGIYIWKIGNF GMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDS HLPWPFQGTIRLTILDQSEAPVRQNHEEIMDAKPDLLAFQRPTIPRNPKGFGYVTFMHLE ALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDSGV NT seq 1569 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctaaactgtgaaaacagctgtggatccagccagtctgaaagtgactgctgt gtggccatggccagctcctgtagcgctgcaacaaaagatgatagtgtgagtggaactgcc agcacggggaacctctccagctcatttatggaggagatccagggatatgatgtagaattt gacccacccctagaaagcaagtacgaatgccccatctgcttgatggcactacgagaagca gtgcaaacaccatgcggccataggttctgcaaagcctgcatcataaaatcaataagggat gcaggtcacaaatgtccagttgacaatgaaatactgctggaaaatcaactatttccagac aattttgcgaaacgtgagattctttctctgatggtgaagtgtccacatgaaggttgtttg cataagatggaactgaggcatcttgaggatcatcaagcacattgtgagtttgctcttgtg gattgtccgcagtgccaacgtcccttccaaaaattccatattaatattcacattctgaag gattgtccaaggagacaggtttcttgtgacaactgtgctgcatcagtggcatttgaagat aaagagatccatgaccagaactgtcctttggcaaatgtcatctgtgaatactgcaatact atactcatcagagaacagatgcctaatcattatgatctagactgccctacagctccaatt ccatgcacattcagtacttttggttgccatgaaaagatgcagagaaatcacttggcacgc cacctacaagagaacacccagtcacacatgagaatgttggcccaggctgttcatagtttg agccttatacccgactctgggtatgtctcagaggtccggaatttccaggaaactatccac cagttagagggtcgccttgtaagacaagaccatcagatccgggagctgactgctaaaatg gaaactcagagtacgtatgtaagtgagctcaaacgaaccattcgaacccttgaggacaaa gttgctgaaattgaagcacagcagtgcaatggaatttacatttggaagattggcaacttt ggaatgcatttgaaatgtcaagaagaggagaaacctgttgtgattcatagccctgggttc tacacaggcaaacccgggtacaaactgtgcatgcgcttgcaccttcagttaccgactgct cagcgctgtgcaaactatatatccctttttgtccacacgatgcaaggagagtatgacagc cacctcccttggcccttccagggtacaatacgccttacaattcttgatcagtccgaagca cctgtaaggcaaaaccatgaagagataatggatgccaaaccagacctgcttgctttccag cgacccacaatcccacggaacccaaaaggttttggctatgtaactttcatgcatctggaa gccctaagacaaagaactttcattaaggatgacacattattagtgcgctgtgaggtctcc acccgcttcgacatgggtagccttcggagggagggttttcagccacgaagtactgattca ggggtatag

Rhinopithecus bieti (black snub-nosed monkey): 108537107 Help Entry 108537107         CDS       T04641                                  Gene name TRAF1 Definition (RefSeq) TNF receptor associated factor 1   KO K03172   TNF receptor-associated factor 1 Organism rbb  Rhinopithecus bieti (black snub-nosed monkey) Pathway rbb04064   NF-kappa B signaling pathway rbb04210   Apoptosis rbb04668   TNF signaling pathway rbb05200   Pathways in cancer rbb05202   Transcriptional misregulation in cancer rbb05203   Viral carcinogenesis rbb05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:rbb00001]  09130 Environmental Information Processing   09132 Signal transduction    04064 NF-kappa B signaling pathway     108537107 (TRAF1)    04668 TNF signaling pathway     108537107 (TRAF1)  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     108537107 (TRAF1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     108537107 (TRAF1)    05202 Transcriptional misregulation in cancer     108537107 (TRAF1)    05203 Viral carcinogenesis     108537107 (TRAF1)   09162 Cancer: specific types    05222 Small cell lung cancer     108537107 (TRAF1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF_BIRC3_bd Not3 Motif Other DBs NCBI-GeneID:  108537107 NCBI-ProteinID:  XP_017739740 UniProt:  A0A2K6KI98 LinkDB All DBs Position Un AA seq 416 aa AA seqDB search MASSSGSSPRPAPDENEFPFGCPPTVCQDPKEPRALCCTGCLSENLRNGEDQICPKCRGE DLQSVSPGSRLRTLERAHPEVAEAGVGCPFAGVGCSFKGSPQSVQEHEVTSQTSHLNLLL GFMKQWKTRMASGLESGPMALEQNLSDLQLQAAVEVARDLEVDCYRAPCSESQEELALQH FMKEKLLAELEGKLRVFENIVAVLNKEVEASHLALATSIHQSQLDRERILSLEQRVVELQ QTLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTGK YGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAID AFRPDLSSASFQRPQSETNVASGCPLFFPLNKLQSPKHAYVKDDTMFLKCIVETST NT seq 1251 nt NT seq  +upstreamnt  +downstreamnt atggcatccagctcaggcagcagcccacgcccggcccctgatgagaatgagttccccttt gggtgccctcccaccgtctgccaggacccaaaggagcctagggctctctgctgtacaggc tgtctctctgagaacctgaggaacggcgaggatcagatctgccccaaatgcagaggggaa gacctccagtctgtaagcccaggaagccgtcttcgaactctggagagggctcatcctgag gtggccgaggctggagttgggtgccccttcgcaggtgtcggctgctccttcaagggaagc ccacagtccgtgcaagagcatgaggtcacctcccagacctcccacctaaacctgctgttg gggttcatgaaacagtggaagacccgaatggcctctggcctggagtctgggcccatggct ctagagcagaacctgtcagacctgcagctgcaggcagccgtggaagtggcgagggacctg gaggtcgattgctaccgggcaccctgctccgagagccaggaggagctggccctgcagcac ttcatgaaggagaagcttctggctgagctggaagggaagctgcgtgtgtttgagaacatt gttgctgtcctcaacaaggaggtggaggcctcccacctggccctggccacctccatccac cagagccagctggaccgtgagcgcatcctgagcttggagcagagggtggtggagctgcag cagaccctagcccagaaagaccaggccctgggcaagctggagcagagcttgcgcctcatg gaggaggcctccttcgatggcaccttcctgtggaagatcaccaatgttaccaggcggtgc catgagtcggcctgtggcaggaccgtcagcctcttctccccagccttctacactggcaag tatggctacaagttatgcctgcggctgtacctgaatggagatggcactggaaagaggacc cacctgtcgcttttcatcgtgatcatgagaggggagtatgatgcgttgctgccgtggcct ttccggaacaaggtcaccttcatgctgctggaccagaacaaccgtgagcacgccattgat gccttccggcctgacctaagctcggcgtccttccagaggccccagagtgaaaccaacgtg gccagtggctgcccactcttcttccccctcaacaaactgcagtcacccaagcatgcctac gtgaaggacgacacgatgttcctcaagtgcatcgtggagaccagcacttag

Rhinopithecus bieti (black snub-nosed monkey): 108539936 Help Entry 108539936         CDS       T04641                                  Gene name TRAF4 Definition (RefSeq) TNF receptor associated factor 4   KO K09848   TNF receptor-associated factor 4 Organism rbb  Rhinopithecus bieti (black snub-nosed monkey) Pathway rbb04657   IL-17 signaling pathway rbb05200   Pathways in cancer rbb05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:rbb00001]  09150 Organismal Systems   09151 Immune system    04657 IL-17 signaling pathway     108539936 (TRAF4)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     108539936 (TRAF4)   09162 Cancer: specific types    05222 Small cell lung cancer     108539936 (TRAF4) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  zf-TRAF zf-Nse zf-TRAF_2 MATH Sina Motif Other DBs NCBI-GeneID:  108539936 NCBI-ProteinID:  XP_017744387 LinkDB All DBs Position Un AA seq 470 aa AA seqDB search MPGFDXKVPEKPKRRLLCPLWRKPMREPVQVSTCGHRFATPGLQEFLSEGVFKCPEDQLP LDYAKIYPDPELEVQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVVPCPNRCPMK LSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAYESHEGMCPQESVYCENKCGARMMRRLL AQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLK DSCSTALVLCPFKDSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELE ELSVGSDGVLIWKIGSYGRRLQEAKAKPNFECFSPAFYTHKYGYKLQVSAFLNGNGSGEG THLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKP GTWRGSLDESSLGFGYPKFISHQDIRKRNYVRDDAVFIRAAVELPRKILS NT seq 1413 nt NT seq  +upstreamnt  +downstreamnt atgcctggtttcgacnntaaagttcctgagaagcccaagcgacggctgctgtgcccactg tggcggaagcccatgcgcgagcctgtgcaggtttccacctgcggccaccgttttgcgaca cctggcctgcaggagttcctcagtgaaggcgtcttcaagtgccctgaggaccagcttcct ctggactatgccaagatctacccagacccggagctggaagtacaagtattgggcctgcct atccgctgcatccacagtgaggagggctgccgctggagtgggccactacgccatctacag ggccacctgaatacctgcagcttcaacgtcgttccctgccctaatcgctgccccatgaaa ctgagccgccgtgatctacctgcgcacttgcagcacgactgccccaagcggcgcctcaag tgcgagttttgtggctgtgacttcagtggggaggcctatgagagccatgagggtatgtgc ccccaggagagtgtctactgtgagaataaatgtggtgcccgcatgatgcggcggctgctg gcccagcatgccacctctgagtgccccaagcgcactcagccctgcacctactgcaccaag gagttcgtctttgacaccatccagagccaccagtaccagtgcccaaggctgcctgttccc tgccccaaccagtgtggtgtgggcactgtggcccgggaggacctgccaggccatctgaag gacagctgtagcactgccctggtgctctgcccattcaaagactccggctgcaagcacagg tgccctaagctggcaatggcacggcatgtggaggagagtgtgaagccacatctggccatg atgtgtgccctggtaagccggcaacggcaggagctgcaggagcttcggcgagagctggag gagctatcagtgggcagtgatggtgtgctcatctggaagattggcagctatggacggcgg ctacaggaggccaaggccaagcccaactttgagtgcttcagccctgccttctacacacat aagtatggttacaagctacaggtgtctgcattcctcaatggcaatggcagtggcgagggc acacacctctcactgtacattcgtgtgctgcctggtgcctttgacaatctccttgagtgg ccctttgcccgccgtgtcaccttctccctgctggatcagagcgaccctgggctggctaaa ccacagcacgtcactgagaccttccaccctgacccaaactggaagaatttccagaagccg ggcacgtggcggggctccctggatgagagttctctgggctttggttatcccaagttcatc tcccaccaggacattcgaaagcgaaactatgtgcgggatgatgcagtcttcatccgtgct gctgttgaactgccccggaagatccttagctga

Rhinopithecus bieti (black snub-nosed monkey): 108542901 Help Entry 108542901         CDS       T04641                                  Gene name TRAF2 Definition (RefSeq) TNF receptor associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism rbb  Rhinopithecus bieti (black snub-nosed monkey) Pathway rbb04010   MAPK signaling pathway rbb04064   NF-kappa B signaling pathway rbb04071   Sphingolipid signaling pathway rbb04141   Protein processing in endoplasmic reticulum rbb04210   Apoptosis rbb04217   Necroptosis rbb04380   Osteoclast differentiation rbb04621   NOD-like receptor signaling pathway rbb04622   RIG-I-like receptor signaling pathway rbb04657   IL-17 signaling pathway rbb04668   TNF signaling pathway rbb04920   Adipocytokine signaling pathway rbb04932   Non-alcoholic fatty liver disease rbb05010   Alzheimer disease rbb05014   Amyotrophic lateral sclerosis rbb05016   Huntington disease rbb05017   Spinocerebellar ataxia rbb05022   Pathways of neurodegeneration - multiple diseases rbb05132   Salmonella infection rbb05135   Yersinia infection rbb05160   Hepatitis C rbb05163   Human cytomegalovirus infection rbb05167   Kaposi sarcoma-associated herpesvirus infection rbb05168   Herpes simplex virus 1 infection rbb05169   Epstein-Barr virus infection rbb05170   Human immunodeficiency virus 1 infection rbb05200   Pathways in cancer rbb05203   Viral carcinogenesis rbb05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:rbb00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     108542901 (TRAF2)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     108542901 (TRAF2)    04064 NF-kappa B signaling pathway     108542901 (TRAF2)    04668 TNF signaling pathway     108542901 (TRAF2)    04071 Sphingolipid signaling pathway     108542901 (TRAF2)  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     108542901 (TRAF2)    04217 Necroptosis     108542901 (TRAF2)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     108542901 (TRAF2)    04622 RIG-I-like receptor signaling pathway     108542901 (TRAF2)    04657 IL-17 signaling pathway     108542901 (TRAF2)   09152 Endocrine system    04920 Adipocytokine signaling pathway     108542901 (TRAF2)   09158 Development and regeneration    04380 Osteoclast differentiation     108542901 (TRAF2)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     108542901 (TRAF2)    05203 Viral carcinogenesis     108542901 (TRAF2)   09162 Cancer: specific types    05222 Small cell lung cancer     108542901 (TRAF2)   09164 Neurodegenerative disease    05010 Alzheimer disease     108542901 (TRAF2)    05014 Amyotrophic lateral sclerosis     108542901 (TRAF2)    05016 Huntington disease     108542901 (TRAF2)    05017 Spinocerebellar ataxia     108542901 (TRAF2)    05022 Pathways of neurodegeneration - multiple diseases     108542901 (TRAF2)   09167 Endocrine and metabolic disease    04932 Non-alcoholic fatty liver disease     108542901 (TRAF2)   09171 Infectious disease: bacterial    05132 Salmonella infection     108542901 (TRAF2)    05135 Yersinia infection     108542901 (TRAF2)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     108542901 (TRAF2)    05160 Hepatitis C     108542901 (TRAF2)    05168 Herpes simplex virus 1 infection     108542901 (TRAF2)    05163 Human cytomegalovirus infection     108542901 (TRAF2)    05167 Kaposi sarcoma-associated herpesvirus infection     108542901 (TRAF2)    05169 Epstein-Barr virus infection     108542901 (TRAF2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rbb03019]     108542901 (TRAF2)    04121 Ubiquitin system [BR:rbb04121]     108542901 (TRAF2) Enzymes [BR:rbb01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      108542901 (TRAF2) Messenger RNA biogenesis [BR:rbb03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      108542901 (TRAF2) Ubiquitin system [BR:rbb04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     108542901 (TRAF2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF_BIRC3_bd zf-TRAF zf-C3HC4 zf-C3HC4_2 zf-RING_6 MATH SlyX Motif Other DBs NCBI-GeneID:  108542901 NCBI-ProteinID:  XP_017748612 UniProt:  A0A2K6M5P0 LinkDB All DBs Position Un AA seq 501 aa AA seqDB search MAAASVTPPGSLELLQPGFSKTLLGTKLEAKYLCSACGNVLRRPFQAQCGHRYCSFCLAS ILSSGPQNCAACVHEGIYEEGISILESSSAFPDNAARREVESLPAVCPIDGCTWKGTLKE YESCHEGRCPLMLTECPACKGLVRLGEKERHLEHECPERSLSCRHCRAPCCGADGKAHHE VCPKFPLTCDGCGKKKIPREKFQDHVKTCGKCRVPCRFHAIGCLETVEGEKQQEHEAQWL REHLAMLLSSVLEAKPLLGDQSHAGSELLQRCENLEKKTATFENIVCVLNREVERVAMTA EACSRQHRLDQDKIEALSNKVQQLERSIGLKDLAMADLEQKVLEMEASTYDGVFIWKISD FARKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDA LLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEA KNSYVRDDAIFIKAIVDLTGL NT seq 1506 nt NT seq  +upstreamnt  +downstreamnt atggctgcagctagcgtgaccccccctggctccttggagttgctacagcctggcttctcc aagaccctcctggggaccaagctggaagccaagtacctgtgctccgcctgcggaaacgtc ctgcgcaggcccttccaggcgcagtgtggccaccggtactgctccttctgcctggccagc atcctcagctctgggcctcagaactgtgctgcctgtgttcacgagggcatatatgaagaa ggcatttctattttagaaagcagttcggctttcccagataatgctgcccgcagggaggtg gagagcctgccagccgtctgtcccattgatgggtgcacctggaaggggaccctgaaagaa tatgagagctgccacgaaggccgctgcccgctcatgctgaccgaatgtcctgcatgcaaa ggcctggtccgcctgggtgaaaaggagcgccacctggagcacgagtgcccagagagaagc ctgagctgccggcattgccgggcgccctgctgcggggcagacgggaaggcgcaccacgag gtctgccccaagttccccttgacttgtgatggctgcggcaagaaaaagatcccccgggag aagtttcaggaccacgtcaagacttgtggcaagtgtcgagtcccttgtagattccacgcc atcggctgcctcgagacggtggagggtgagaaacagcaagagcacgaggcacagtggctg cgggagcacctggccatgctcctgagctcggtgctggaggcaaagcctctcttgggagac cagagccatgcggggtcagagctcctacagaggtgcgagaacctggagaagaagacggcc acttttgagaacattgtctgtgtcctgaaccgggaggtggagagggtggccatgactgcc gaggcctgcagccggcagcaccggctggaccaagacaagattgaagccctgagtaacaag gtgcagcagctggagaggagcattggcctcaaggatctggcgatggctgacctggagcag aaggtcttggagatggaggcatccacctacgatggggtcttcatctggaagatctcagac ttcgccaggaagcgccaggaagctgtggccggccgcacacccgccatcttctccccagcc ttctacaccagcaggtacgggtacaagatgtgtctgcgtatctacctgaacggcgacggc accgggcgaggaacacacctgtccctcttctttgtggtgatgaagggcccgaatgacgcc ctgctgcggtggcccttcaaccagaaggtgaccttaatgctgctcgaccagaataatcgg gagcacgtgattgatgccttcaggcccgacgtgacctcgtcctcttttcagaggccagtc aatgacatgaacatcgcaagcggctgccccctcttctgccctgtctccaagatggaggcc aagaattcctacgtgcgggacgatgccatcttcatcaaggccattgtggacctgacaggg ctctaa

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