KEGG   Rhinopithecus bieti (black snub-nosed monkey): 108533259Help
Entry
108533259         CDS       T04641                                 

Gene name
SETDB1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
rbb  Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb00310  Lysine degradation
rbb04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:rbb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    108533259 (SETDB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    108533259 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rbb03036]
    108533259 (SETDB1)
Enzymes [BR:rbb01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     108533259 (SETDB1)
Chromosome and associated proteins [BR:rbb03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     108533259 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108533259 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET Pre-SET MBD DUF4537 53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID: 108533259
NCBI-ProteinID: XP_017733255
LinkDB All DBs
Position
Un
AA seq 1300 aa AA seqDB search
MSSLPGCIGLDAATATVESEEIAELQQAVVEELGISMEELRHFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDESSRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYVTAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGQLRTRP
NMGAVRSKGPVVQYTQDLTSTATQFKPVEPPQPTAPPAPPFPPAPPLSPQAGDSESLESQ
LAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENVSGGKPGINQTYRSPLGSTASAPAP
SAPPAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRNEQYRGKNP
LLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFC
LDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFI
NTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVY
ECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTD
DFADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPE
ESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETTSKDSHPPDLGPLHIPV
PPSIPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSHSSFKTNEGGEGRAGGSRM
EAEKASTSGLGIKDEGDIKQAKKEDPDDRNKMSVVTESSRNYGYNPSPVKPEGLRRPPSK
TSMHQSRRLMASAQSNPDDVLTLSSSTESEGESGTSRKPTAGQTSATAVDSDDIQTISSG
SEGDDFEDKKNMTGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVDKGESAPVRKNTRQ
FYDGEESCYIIDAKLEGNLGRYLNVRPLSPPLDAGLSHGLQISFNILYKPTFSCYKLLIS
KDLKEVAFFQSICYNGEGQTAFFFQLSLSLQSQIVSLALI
NT seq 3903 nt NT seq  +upstreamnt  +downstreamnt
atgtcttcccttcctgggtgcattggtttggatgcagcaacagctacagtggagtctgaa
gagatagcagagctgcaacaggcagtggttgaggaactgggtatctctatggaggaactt
cggcatttcatcgatgaggaactggagaagatggattgtgtacagcagcgcaagaagcag
ctagcagagttagagacatgggtaatacagaaagaatctgaggtggctcacgttgaccag
ctatttgatgatgcatccagggcagtgactaattgtgagtctttggtgaaggacttctac
tccaagctgggactacaataccgggacagtagctctgaggacgaatcttcccggcctaca
gaaataattgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
gggagccgaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaagtca
gctcaagatgttcagaagttcatggatgctgtcaacaagaagagcagttcccaggatctg
cataaaggaaccttgagtcagatgtctggagaactaagcaaagatggtgacctgatagtc
agcatgcgaattctgggcaagaagagaactaagacatggcacaaaggcacccttattgcc
atccagacagttgggccggggaagaaatacaaggtgaaatttgacaacaaaggaaagagt
ctactgtcggggaaccatattgcctatgattaccaccctcctgctgacaagctgtttgtg
ggcagtcgggtggtcgccaaatacaaagatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgatggc
tatgcttcctatgtcacacagtctgaactgtatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgtgacttcatagaggagtatgtaactgcctac
cccaaccgccccatggtactgctcaagagtggccagcttatcaagactgagtgggaaggc
acatggtggaagtcccgagttgaggaggtggatggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgagtggatctatcgaggctctacacggctggagcccatgttcagc
atgaaaacatcctcagcctctgcactagagaagaagcaaggacagctcaggacacgtcca
aatatgggtgctgtgaggagcaaaggccctgttgtccagtacacacaggatctgaccagt
actgcaacccagttcaagccagtggaacccccacagcctacagctccacctgccccacct
ttcccacctgctccacctctgtctccccaagcaggtgacagtgaaagcttggaaagccag
cttgcccagtcacggaagcaggtagccaaaaagagcacatccttccgaccaggatctgtg
ggctctggtcattcctcccctacgtctcctgcactcagtgaaaatgtctctggtgggaaa
cctgggatcaaccagacgtatagatcacctttaggctccacagcctctgccccagcaccc
tcagcacccccagcccctccagcacccccagccttccatggcatgctggagcgggcccca
gcagagccctcctaccgtgctcccatggagaagcttttctacttacctcatgtctgcagc
tatacctgtctgtctcgagtcagacctatgaggaatgagcagtaccggggcaagaaccct
ctgctggtcccattactatatgacttccggcggatgacagcccggcgtcgagttaaccgc
aagatgggctttcatgttatctataagacaccttgtggtctttgccttcggacaatgcag
gagatcgaacgctaccttttcgagactggctgtgacttcctcttcctggagatgttctgt
ttggatccatatgttcttgtggaccgaaagtttcagccctataagcctttttactatatt
ttggacatcacctatgggaaggaagatgttcccctgtcctgtgtcaatgagattgacaca
acccctccaccccaggtggcctacagcaaggaacgtatcccgggcaagggtgttttcatt
aacacaggccctgaatttctggttggctgtgactgcaaggatgggtgtcgggacaagtcc
aagtgtgcctgccatcaactaactatccaggctacagcctgtaccccaggaggccaaatc
aaccctaactctggctaccagtacaagagactagaagagtgtctacccacaggggtatat
gagtgtaacaaacgctgcaaatgtgacccaaacatgtgcacaaaccggttggtacaacat
ggactacaagttcggctacagctattcaagacacagaacaagggctggggtatccgctgc
ttggatgacattgccaaaggctcttttgtctgtatttatgcaggcaaaatcctgacagat
gactttgcagacaaggagggtctggaaatgggtgatgagtactttgcaaatctggaccat
atcgagagcgtggagaacttcaaagaaggatatgagagtgatgccccctgttcctctgac
agcagtggtgtagacttgaaggaccaggaagatggcaacagcggtacagaggaccctgaa
gagtccaatgatgatagctcagacgataacttctgtaaggatgaggacttcagcaccagt
tcagtgtggcggagctatgctacccggagacagacccggggccagaaagagaacggactc
tctgagacaacttccaaggactcccaccccccagatcttggacccctacatattcctgtt
cctccctcgatccctgtaggtggctgcaatccaccttcctctgaagagacacccaagaac
aaggtggcctcatggttgagctgcaatagtgtcagtgaaggtggctttgctgactctgat
agccattcatcctttaagactaatgaaggtggggagggccgggctgggggaagccgaatg
gaggctgaaaaggcctccacctcaggactaggcatcaaggatgagggagacatcaagcaa
gccaagaaagaggaccctgacgaccgaaacaagatgtcagtagttactgaaagctctcga
aactacggttacaatccttctcccgtgaagcctgaaggacttcgccgcccacctagtaag
actagtatgcatcaaagccgacgactcatggcttctgctcagtccaaccctgatgatgtc
ctgacactgtccagcagcacagaaagtgagggggaaagtgggaccagccgaaagcccact
gctggtcagacttcggctacagcggttgacagtgatgatatccagaccatctcctctggc
tctgaaggggatgactttgaggacaagaagaacatgactggtccaatgaagcgtcaagtg
gcagtaaagtcaacccgaggctttgctcttaaatcaacccatgggattgcaattaaatca
accaacatggcctctgtggacaagggggagagtgcacctgttcgtaagaacacacgccaa
ttctacgatggcgaggagtcttgctacatcatcgatgccaagcttgaaggcaacctgggc
cgctacctcaacgtgagacccctctccccacctctagatgctggattatcccatggtctt
cagatttcttttaacatactctataagcccaccttttcttgttataaactcttgatctca
aaggatcttaaagaggtagctttctttcaaagcatctgttataatggggagggtcagaca
gcatttttcttccaactctcactctccctgcaaagccagattgtttccctggctcttatt
tga

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