KEGG   Rhinopithecus bieti (black snub-nosed monkey): 108541384Help
Entry
108541384         CDS       T04641                                 

Gene name
LIG3
Definition
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
rbb  Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03410  Base excision repair
Module
rbb_M00296  BER complex
Brite
KEGG Orthology (KO) [BR:rbb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108541384 (LIG3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rbb03400]
    108541384 (LIG3)
Enzymes [BR:rbb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     108541384 (LIG3)
DNA repair and recombination proteins [BR:rbb03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     108541384 (LIG3)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme Synaptonemal_3
Motif
Other DBs
NCBI-GeneID: 108541384
NCBI-ProteinID: XP_017746397
LinkDB All DBs
Position
Un
AA seq 1009 aa AA seqDB search
MSLAFKILFPQTLRALSRKELCLFQEHHRPDVRQFSQWSETDLLHGHPFFLRRKPVLSFQ
GSHLRSRATCLVFLPGLHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGICRIG
KVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQITQH
IADLSSKAAGTPKKKAVVQAKLTTTGQVTSPVKSASFVTGNNPRKFSGFSAKANNSGEAP
SSRTPKRSLSSSKCDPKHKDCLLREFRKLCAMVADNPSYNTKTQIIQDFLRKGSAGDGFH
GDVYLTVKLLLPGVVKTVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQ
SKSFPPAAKSLLTIQEVDEFLLRLSKLTKEDEQQQVLQDIASRCTANDLKCIIRLIKHDL
KMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTP
VQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAH
FKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIYF
NDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKASDLADMITRVIREGLEGLVLK
DVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPGS
QKWCTVTKCAGGHDDATLARLQKELDMVKISKDPSKIPSWLKVNKIYYPDFIVPDPKKAA
VWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKADFTV
VAGDEGSSTTGGSSEENKGPSGSAVSRKAPSKPSASTKKAEGKLSNSNSKGGNMLTAKPS
AVKVGERLAMKSSPVKVGEKRKAADETLCQTKVLLDIFTGVRLYLPPSTPDFSRLRRYFV
AFDGDLVQEFDMTSATHVLDSRDKNPVAQQVSPEWIWACIRKRRLVAPC
NT seq 3030 nt NT seq  +upstreamnt  +downstreamnt
atgtctttggctttcaagatcctctttccacaaaccctccgtgcactcagccgaaaagaa
ctgtgcctattccaagaacatcacaggcctgatgtaagacaattcagccagtggtcagaa
acagatctgcttcatggacaccccttcttcctgagaagaaagcctgttctgtcattccag
ggaagccatctaagatcacgtgccacctgccttgttttcttgccagggttgcatgtggga
ctctgcagtggcccctgtgagatggctgagcaacggttctgtgtggactatgccaagcgt
ggcacagctggctgcaaaaaatgcaaggaaaagattgtgaagggcatatgccgaattggc
aaagtggtgcccaatcccttctcagagtctgggggtgatatgaaagagtggtatcacatt
aaatgcatgtttgagaaactagagcgggcccgggccaccacaaaaaaaatcgaggacctc
acagagctggaaggctgggaagagctggaagataatgagaaggaacagataacccagcac
attgcagatctgtcttctaaggcagcaggtacaccaaagaagaaagctgttgtccaggct
aagttgacaaccactggccaggtgacttctccggtgaaaagcgcctcatttgtcaccggt
aacaatccccggaaattttctggcttttcagccaaggccaacaactctggggaagccccc
tcaagccgcacccctaagagaagtctgtcttcaagcaaatgtgaccccaagcataaggac
tgtctgctacgggagtttcgaaagttatgcgccatggtggccgataatcctagctacaac
acgaagacccagatcatccaggacttcctgcggaaaggctcagcaggagatggtttccac
ggtgatgtgtacctaacggtgaagctgctgctgccaggagtcgttaagactgtttacaac
ttgaatgataagcagattgtgaagcttttcagtcgcatttttaactgcaacccagatgat
atggcacgggacctagagcagggtgacgtgtcagagacaatcagagtcttctttgagcag
agcaagtctttccccccagctgccaagagcctccttaccatccaggaggtggatgagttc
cttctgcggctgtccaagctcaccaaggaggatgagcagcaacaggtcctgcaggacatt
gcctccaggtgtacagccaatgaccttaaatgcatcattaggttgatcaaacatgatctg
aagatgaactcaggtgcaaaacatgtgttagacgcccttgaccccaatgcctatgaagcc
ttcaaagcctcgcgcaacctgcaggatgtggtggagcgggtccttcacaatgcgcaggag
gtggagaaggagccgggccagagacgagctctgagcgtccaggcctcgctgatgacacct
gtgcagcccatgctggcggaggcctgcaagtccattgaatacgcaatgaagaaatgtccc
aatggcatgttctctgagatcaagtacgatggagagcgagtccaagtgcataagaatgga
gaccacttcagctacttcagccgcagtctcaagcccgtcctgcctcacaaggtagcccac
tttaaggactacatcccccaggcttttcctgggggacacagcatgatcttggattctgag
gtgcttctgattgacaacaagacaggcaaaccactgccctttgggactctgggagtgcac
aagaaagcagccttccaggatgctaatgtctgcctgtttgtttttgattgtatctacttt
aatgatgtcagcttgatggacaggcctctgtgtgagcggcggaagtttcttcatgacaac
atggttgaaattccaaaccggatcatgttctcagaaatgaagcgagtcacaaaagcttcg
gacttggctgacatgataacccgggtgatccgggagggattggaggggctggtgctgaag
gatgtgaagggtacatatgagcctgggaagcggcactggctgaaagtgaagaaagactat
ttgaacgagggggccatggccgacacagctgacctggtggtccttggggccttctatggg
caagggagcaaaggcggcatgatgtcaatcttcctcatgggctgctacgaccctggcagc
cagaagtggtgcacagtcaccaagtgtgcaggaggccatgatgacgccacgcttgcccgc
ctgcagaaggaactagacatggtgaagatcagcaaggaccccagcaaaatacccagctgg
ctgaaagtcaacaagatctactatcctgacttcatcgtcccagacccaaagaaagctgcc
gtgtgggagatcacaggggctgaattctccaaatcggaggctcacacagctgatgggatc
tccatccgattccctcgctgcacccgaatccgagatgataaggactggaaatctgccact
aaccttccccaactcaaggaactgtaccagttgtccaaggagaaggcagacttcactgta
gtggctggagatgaggggagctccactacagggggtagcagtgaagagaataagggtccc
tcagggtctgctgtgtcccgcaaggcccccagcaagccctctgccagtaccaagaaagca
gaagggaagctgagtaactccaacagcaaaggcggcaacatgctgactgcaaagccttct
gctgtgaaggtgggagagaggctggccatgaagtcttctccagtgaaagtaggggagaag
cggaaagctgctgatgagaccctgtgccaaacaaaggtactgctggacatcttcactgga
gtgcggctttacttgccaccctccacaccagacttcagccgtctcagacgctactttgtg
gcattcgacggggacctggtacaggaatttgatatgacctcagccacacatgtgctggat
agcagggacaagaaccctgtggcccagcaggtctccccagagtggatttgggcatgtatc
cggaaacggagactggtagctccctgctag

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