Mucinivorans hirudinis: BN938_2142
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Entry
BN938_2142 CDS
T03205
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rbc
Mucinivorans hirudinis
Pathway
rbc03030
DNA replication
rbc03430
Mismatch repair
rbc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN938_2142
03430 Mismatch repair
BN938_2142
03440 Homologous recombination
BN938_2142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbc03032
]
BN938_2142
03400 DNA repair and recombination proteins [BR:
rbc03400
]
BN938_2142
Enzymes [BR:
rbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN938_2142
DNA replication proteins [BR:
rbc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN938_2142
DNA repair and recombination proteins [BR:
rbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN938_2142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
CDN32215
UniProt:
A0A060R9C8
LinkDB
All DBs
Position
2187018..2190626
Genome browser
AA seq
1202 aa
AA seq
DB search
MFTHLHTHTQYSILDGAAAIKKLLARAGELGQRALAITDHGNMFGVKEFHAAANKAGIKP
ILGCEVYVATGSRLDKGGKEDRGGDHLILLAKNPTGYHNLVRLVSYAWTEGFYYNPRIDK
DLLAKYHEGLICCSACLGGEIPQFLLKNDRRGAEEAVQWFKNLFGEDYYLELQLHPSGNS
YIDERVYHNQKRINGEIVEIAAKYGVKCVATNDVHYVKADDAASHDRLICLSTGKDLDDP
NRMRYTTQEYLKSEEEMLALFAEYPEAVSNTQEIVDKIESYSLSHKPYMPSFPLPEGFEI
DFERLRSSLVVFLKEKTELIELVNAAQSIENLPYCAELELARQQLYLEHISRVGFAKRYG
DNPPVANVERLDFELKTIEWMGFPGYFLIVWDFIRAGREMGVSVGPGRGSAAGSVVAYCL
GITNIDPIKYDLLFERFLNPERISMPDVDIDFDEDGREKVLKYVVDKYGQKRVAHIITFG
TMAAKSSIKDVARIHKLPLSESDRLSKMVPESPGITLEKAYKEVPELAAEKESENDLIRD
TLSFAERLEGSVRQTGVHACGVIIGSDDLENFIPMSTAKDAELFVVQYEGSQVEDVGLLK
MDFLGLKTLSIIKDAVENVKLSKGIDIDIDSVSLEDKKTFELYSAGDTTGLFQFESPGMK
KHLRNLKPNRFEDLIAMNALYRPGPMEYIDSFIRRKHGHEKIEYDLPDMEEYLADTYGIT
VYQEQVMLLSQKLAGFTKGQADTLRKAMGKKMRDVLDKMKATFIEGATAKGHPADVCGKI
WKDWEAFAQYAFNKSHSTCYAYVSYQTAYLKAHYPAEFMAALLSRNLSDIKKISTFMDEC
KRMGAAVKGPDVNHSYLKFSVDENGFIRFGLGGIKGVGENASLAIIAERRANGRFKDIYD
FVERVPLQVVNKKNLECLATSGALDSLVSFHRSLFFATDPKGGNYIEQILRYGNLVQTEK
NSAQNSLFGDMFGNEVSVQRPLPTEGQEWGKLEMLEKERELVGIYLSSHPLDDYRLVIEK
YCTNPLSDLSDIKALNGRKIRVAGMVTSVKHLSTKAGKPYGRMVVEDFSGSHEFTFFSRD
WENFRPFCFEQNALLINARVGEHPFRPGELELAVESMELLSKVIDRINNIEVDISVNEIS
DEFIDNIHGFALANSGNIMLNFNIYDAEGGVNVRLKSRSMGVELNGATTNFFEEYGLQFR
IS
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgtttacacacctacatacacacacacaatattcaatcttggacggggcggcggcaatc
aagaaattgctcgcgcgtgccggcgagttggggcagagggcgcttgccattaccgaccat
ggcaatatgttcggggtcaaggagtttcacgcggcagcgaataaggcgggcattaaaccg
attctcggttgtgaggtctatgttgccaccggcagccgcttggacaaggggggcaaggaa
gaccgcggcggcgaccaccttattctacttgccaaaaatccaacgggttatcacaacttg
gtgcggttggtctcttatgcttggacagaggggttctactataatccgcgtatcgacaag
gatttactcgcaaaatatcacgagggattgatttgctgttcggcgtgccttgggggcgag
attcctcaatttttgttgaaaaatgacagacggggggctgaggaggctgtgcagtggttc
aaaaacctatttggggaggattattatcttgaattgcagctacacccctcgggtaattca
tacattgatgagcgagtatatcacaaccaaaagcgtatcaacggggagatagtggagatt
gcggcaaaatacggtgttaaatgtgtggctaccaatgatgtgcactatgttaaggcggac
gatgccgcatcgcacgaccgtctgatttgcctctccacgggtaaggatttggacgacccc
aaccgtatgcgatacaccacgcaggagtacctgaaaagcgaggaggagatgctcgcgctg
tttgcggaatatcccgaggcggtgagcaatacgcaggagattgttgataaaatcgaaagc
tattcgctcagtcacaagccatatatgccttcgtttccgctgccggagggttttgagatt
gatttcgagagattgaggagttcattagtggtttttctcaaagaaaaaaccgagttgata
gaacttgtgaatgcagctcaaagcattgagaatctgccgtattgtgccgaattggagttg
gcacgtcagcaactgtatttggagcacatctcgcgcgtaggtttcgcaaaaagatatggc
gacaatccccctgtggcgaatgtggaacggcttgactttgagttgaaaaccattgaatgg
atggggtttccggggtattttcttatcgtttgggactttattcgcgccgggcgcgagatg
ggtgtttctgttggtccggggcgtggttcggcggctggctctgtggtggcttactgtttg
ggtatcactaatatagaccccataaaatatgaccttctttttgaacgtttcctgaatccc
gagcgcatttcgatgcccgatgtcgatattgacttcgacgaggacgggcgcgaaaaagtg
ctgaaatatgtggtggataaatacgggcaaaagcgtgttgctcatatcattacctttggt
acgatggcggctaaatcatctatcaaggatgttgcgcgaatacacaaactacccctttcg
gagagcgaccgtctgagcaaaatggtgcccgaatcgccggggattaccctcgaaaaggcg
tacaaggaggtgcccgaacttgctgccgagaaggagtcggagaacgatttgatacgcgac
acgcttagctttgccgagcggttggagggttctgtgcgtcagactggtgtccacgcctgc
ggggtgattatcgggagcgacgacctcgaaaatttcatcccgatgtccaccgccaaggat
gccgaactctttgtggttcagtatgaaggtagtcaggtggaggatgtgggactgctcaag
atggactttttgggactcaagaccttgtctataattaaggatgcggttgaaaatgttaaa
ttatcaaaaggtattgatatagatatagatagcgtatcactcgaggataaaaaaaccttt
gagctctattcggcgggcgacacaacgggcttgttccagttcgagtcgccggggatgaaa
aagcaccttagaaacctcaaacccaaccgtttcgaggatttgattgcgatgaacgccctc
taccgtcccggtccgatggagtatatcgactcgttcattcgccgcaaacacggacacgaa
aagattgagtacgacctgcccgatatggaggagtatttggctgacacttatggcattacc
gtctatcaagagcaggtgatgttgttgtcgcaaaaactggcgggattcaccaaggggcag
gcagacacccttcgtaaggcgatgggtaagaagatgcgcgacgtgttggacaagatgaag
gcgacctttattgagggggcgactgccaaggggcatccggctgatgtttgcgggaaaatt
tggaaagactgggaggcgtttgctcaatatgcctttaataagtctcactcaacctgttac
gcctatgtctcctaccagactgcctacctcaaggcgcactatcctgccgagtttatggcg
gcacttctgagccgcaacctgtcggatatcaagaagataagcacctttatggatgagtgc
aaacggatgggggctgccgtgaaaggtccggacgtaaatcactcatacctaaaattttcg
gtagacgaaaatggttttataaggttcggtcttgggggcataaagggtgtgggcgaaaat
gcctcactcgccattattgcagagaggcgtgcgaatgggcggttcaaggatatttacgat
tttgtggagcgagtgccgctgcaagtggttaataaaaagaatcttgagtgtttggcaaca
tcgggtgcgctggattctcttgttagttttcaccgcagccttttcttcgccaccgacccc
aagggggggaattatattgagcagatattgcgctacggcaacttggtgcagaccgagaag
aactccgcacaaaacagcctctttggtgatatgttcggcaacgaagtttctgtgcaaaga
cccctgccaaccgagggtcaggagtggggtaagctggaaatgttggagaaggagcgcgaa
ttggtaggcatctacctcagctcccacccgctggacgactaccgcttggtcatcgaaaag
tattgcaccaaccccctttccgacctttccgacatcaaagccctaaacggacgcaaaatt
cgcgttgcggggatggtaacctcggttaaacacctaagcaccaaggctggtaagccctat
gggcgaatggtggtagaggatttttcgggcagccacgagttcacttttttctcgcgcgat
tgggagaatttccgccctttttgtttcgagcaaaatgccctactcatcaatgcacgcgtg
ggcgagcaccccttccgaccgggtgaattggagttggcggtggagtcgatggagcttctg
agcaaggttattgaccgcataaacaatatagaagtagatatttccgtcaatgaaatcagc
gatgaatttatcgacaatattcacggttttgcgctcgccaacagcggtaatattatgctc
aattttaatatctatgatgctgagggtggtgtgaatgtgaggctgaaatctcgctcgatg
ggggtagagttgaatggcgcgacgacaaattttttcgaggagtatggtttgcaattcaga
atttcttag
DBGET
integrated database retrieval system
