Rhodobaca barguzinensis: BG454_05080
Help
Entry
BG454_05080 CDS
T05218
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rbg
Rhodobaca barguzinensis
Brite
KEGG Orthology (KO) [BR:
rbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbg03032
]
BG454_05080 (gyrB)
03400 DNA repair and recombination proteins [BR:
rbg03400
]
BG454_05080 (gyrB)
Enzymes [BR:
rbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BG454_05080 (gyrB)
DNA replication proteins [BR:
rbg03032
]
Prokaryotic type
DNA Topoisomerases
BG454_05080 (gyrB)
DNA repair and recombination proteins [BR:
rbg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BG454_05080 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ATX65276
UniProt:
A0A2K8K8L0
LinkDB
All DBs
Position
complement(1052570..1054987)
Genome browser
AA seq
805 aa
AA seq
DB search
MSAEAAKRDEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADFVTVIIHADSSVSVMDNGRGIPTDIHTEEGVSAAEVIMTQLHAGGKFDQNSYKVSGG
LHGVGVSVVNALSDWLELRIWRGGKEHVARFERGDTVKHLTVVGDAGDKTGTEVRFLAST
DTFSNLDYNFKTLENRLRELAFLNSGVRIILEDHRPAEMLRSELFYEGGVREFVRHLDRS
KTPVMAEPIYIVGERDEIGVEIAMWWNDSYHETVLPFTNNIPQRDGGAHLAGFRGALTRT
INAYAQSSGIAKKEKVSFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPAVESL
VNEKLAEWFEENPIHAKGIVGKIIEAALAREAARKARELTRRKTALDVASLPGKLADCQE
RDPAKSELFLVEGDSAGGSAKQGRSRQNQAVLPLRGKILNVERARFDRMLGSQEIGTLIT
ALGTGIGRDEFDLSKLRYHKIVIMTDADVDGAHIRTLLLTFFFRQMPELIEGGHLYIAEP
PLFKVARGKSEVYLKDKPALEDYLIEQGVEGAALRLATGEEIVGQDLARVVTEARAVRRS
LVAFPTHYPQHILEQASIAGALLPEALSANPQQLADSVAQRLDLVAAEYERGWEGRPTQD
GGLRLSRVLRGVEEVRRLDGPVLRSGEARRLSSHTESLQEIYSQPAELIRRDRKQKIYGP
VDLLEAILTEGEKGLSLQRYKGLGEMNPDQLWETTLDPEARTLLQVKIDDLAEADDIFTK
LMGDVVEPRREFIQRNALSVENLDA
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgaagccgccaagcgcgacgaatacggcgctgattcgatcaaggttctcaag
gggttggatgctgttcgcaaacgccctggcatgtatattggtgacactgacgatgggtct
ggcctgcaccacatggtgtatgaggtcgtcgataatggtattgacgaggctttggccggg
cacgccgattttgttaccgtcatcatccatgccgacagttcagtatcggtcatggataac
gggcgcggaattccgaccgatattcacacggaagaaggcgtatctgcggcagaggtcatc
atgacccagctacacgcaggcggcaagtttgaccagaacagctacaaggtttctggcggg
ttgcatggcgtgggtgtttcggttgtcaacgcattgtcggactggctggagctgcgcatc
tggcgcgggggcaaggaacatgtcgcgcggtttgaacgcggcgatacggtcaagcatctg
acagtggtgggggatgcaggcgacaagaccggcacggaagtgcggttccttgcctcgacc
gatactttttcgaatcttgattacaatttcaagacgttggaaaaccggctgcgcgagctt
gcctttctgaattcgggcgtgcggatcattctggaagaccaccgccccgccgaaatgttg
cgatccgagctgttctatgaaggcggggtgcgtgaattcgtgcgccatctggaccgctcg
aaaacgccggtgatggcagagccgatttacattgtgggcgagcgcgacgaaatcggtgtt
gagatcgcgatgtggtggaatgacagctatcatgaaacggtactgccctttaccaacaat
atcccacagcgcgatggcggggcgcatctggcggggtttcgtggcgcgctgacccgcacg
atcaacgcctatgcgcaatcgtcagggatcgcgaagaaggaaaaggtcagttttaccggc
gatgacgcgcgcgaggggctgacatgcgtcttgtcggtcaaggtgccggacccgaaattt
tctagccagaccaaggacaagcttgtctcgtccgaggtgcgcccggcagtcgaatctctg
gtgaatgaaaagctggccgaatggttcgaggaaaacccgatccatgccaaggggattgtt
ggcaagatcattgaggccgcgctggcccgcgaagccgcgcgcaaggcgcgcgagttgaca
cggcgcaagaccgcgctggatgtggcgtcactgcccggcaaactggctgattgtcaggaa
cgcgaccccgccaagtcggaactgtttctggtcgagggcgactcggctggtggttcggcc
aaacagggccgttcgcgccagaatcaagccgttctgcccttgcgcggcaagatcctgaat
gtagagcgcgcgcgctttgaccgaatgcttggcagtcaggaaatcggcacgctgatcacc
gcgctgggcaccgggatcgggcgcgacgaattcgacctgagcaagctgcgttaccacaag
atcgtcatcatgaccgacgcggatgtggatggcgcgcatattcgcacgcttttgctgacc
ttcttcttccgccagatgcccgaactgatcgagggtgggcatctttatattgccgagcca
cctttgttcaaggtcgcgcgcggaaaatccgaggtctatctgaaagacaagcctgcactg
gaagattacctgattgaacagggcgtcgaaggtgcggccctgcgtctggccacaggcgaa
gagattgtggggcaggatctggcgcgcgtggtgaccgaagcgcgtgccgtgcgccgctcg
ctggtcgcctttcccacgcattacccgcagcatattctggaacaggccagcatcgcgggc
gcgcttttgccagaggctttgtcagccaatccgcagcaactggccgatagtgttgcccag
cgtctggaccttgtcgcggccgaatatgaacgcggatgggaaggtcgccccactcaggac
ggggggttgcggctgtcgcgggttctgcggggggtagaagaagtgcgcaggctggatggg
cctgtcctgcgttcgggcgaggcgcggcgtctgtccagccataccgaaagcttgcaggaa
atctattcccaacctgccgagcttatccgccgcgaccgcaagcagaagatttacggcccg
gttgatctgcttgaagcaatcctgacagagggcgaaaagggcctgtccctacaacgctac
aaaggcttgggggaaatgaaccctgaccagctttgggaaacgacactggacccagaggcg
cgcaccctgttgcaggtcaagatcgacgatctggcagaagccgatgatatctttaccaag
cttatgggcgatgtggtcgagccgcggcgtgaattcattcagcgcaatgcgttgagtgtc
gagaatctggacgcctga
DBGET
integrated database retrieval system