Robiginitalea biformata: RB2501_04080
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Entry
RB2501_04080 CDS
T00992
Name
(GenBank) Holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
rbi
Robiginitalea biformata
Pathway
rbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RB2501_04080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbi03400
]
RB2501_04080
Enzymes [BR:
rbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
RB2501_04080
DNA repair and recombination proteins [BR:
rbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RB2501_04080
RecFOR pathway proteins
RB2501_04080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
Motif
Other DBs
NCBI-ProteinID:
EAR16044
UniProt:
A4CGI6
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All DBs
Position
complement(190993..191559)
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AA seq
188 aa
AA seq
DB search
MSKLTASETIILGIDPGTTIMGFGIIRVQGKQMEFVQMNELILRKYDDPFTKLKLIFDRT
LELIDTYHPDEIAIEAPFYGKNVQSMLKLGRAQGVAMAAGLSRQVPITEYLPKKIKMAIT
GNGNASKEQVARMLQSLLELKSLPKNLDSTDGLAAAVCHFYNQGKPTGAKSYSGWEAFVK
QNTGRTSE
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaactgacagcatccgaaaccattatcctgggtatcgacccggggaccaccatc
atgggctttggcattatacgcgtgcagggcaaacaaatggaattcgtccagatgaacgag
cttatcctgcgcaagtacgacgacccgttcaccaagctaaaactcatcttcgaccgcacc
ctggaacttatcgacacctaccacccggacgaaattgccatcgaggcgcccttttacggc
aagaacgtccagtccatgctgaaactcggccgggcccagggggtggccatggctgccggg
ctttcccgacaggtcccgattacggaatacctgcccaaaaagatcaaaatggccatcacc
ggcaacgggaatgccagcaaggagcaggtggcccggatgctgcagtccctgctggagctc
aaatccctgcccaaaaacctggacagcacggacggcctggcagcggctgtctgccacttc
tacaaccagggcaagcccacgggggcgaagtcctattcgggatgggaggcctttgtcaaa
cagaataccggccggacgtcggagtga
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