Robiginitalea biformata: RB2501_08660
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Entry
RB2501_08660 CDS
T00992
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rbi
Robiginitalea biformata
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rbi03009
]
RB2501_08660
Enzymes [BR:
rbi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
RB2501_08660
Ribosome biogenesis [BR:
rbi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RB2501_08660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
EAR16960
UniProt:
A4CJ52
LinkDB
All DBs
Position
1186983..1187894
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AA seq
303 aa
AA seq
DB search
MDKSDGKKSGGSSGRQGGNSGRKSSGRQGGNGDRRASGRQGGNYRKKSFSRGNAPIRKAA
PRRTGTPGLIRLNKYIANAGICSRREADTYIAAGNVTVNGKTITEMGYKVQPTDEVRFDG
RLLQRERKEYVLLNKPRNFITTTRDEKGRRTVMELISRASNARLVPVGRLDRNTTGLLLF
TNDGELAKKLTHPKHGVRKIYHVELDKTFKSADLGKLREGLELEDGRIEVDEASYIDGAS
KKEVGVELHSGRNRIVRRIFEHLGYQVVKLDRVVLAGLTKKDLPRGHWRHLTEQEVINLR
MIQ
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggataaatccgacgggaaaaaaagcgggggttcttcgggccggcaaggcggtaactca
ggccgtaaatcgtccggcaggcagggtggaaacggcgatcgccgcgcctcgggcaggcag
ggcggcaactaccggaaaaagagcttttccagggggaatgccccgattagaaaggccgcc
ccgcggcggaccgggaccccgggcctcatacgcctcaacaaatacattgccaatgccggg
atttgctcccgcagggaggcggacacctatattgcggcgggcaatgtgacggtcaacggg
aaaacgatcaccgagatgggctataaggttcagcctaccgatgaggttcggtttgacggc
cggttgctgcagcgtgaaaggaaggaatacgtgctgttgaacaagccccggaattttatc
actaccacccgggacgaaaaaggacgacgcaccgtcatggagctgatttcccgcgcctca
aacgcccggctggtccccgtgggtcggctggaccggaataccaccgggctgttgcttttc
accaatgacggcgagctcgccaagaaactcacccacccgaagcacggggtgcggaaaatc
taccacgtggaactggacaagacctttaaatcggccgacctgggaaaacttcgggaaggc
ctcgagctggaggacgggcgcatcgaagtggatgaggcgagctacattgacggggcctcg
aaaaaggaggtgggcgtggagctccacagcgggcgcaaccggattgtgcgccggattttt
gaacacctcggctaccaggtggtgaagctggaccgggtagtcctggcgggcctcaccaaa
aaggacctgccgcggggacattggcggcaccttaccgaacaggaggtgatcaacctgcga
atgatccaataa
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