Robiginitalea biformata: RB2501_11347
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Entry
RB2501_11347 CDS
T00992
Name
(GenBank) hydroxymethylglutaryl-CoA lyase like protein
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rbi
Robiginitalea biformata
Pathway
rbi00280
Valine, leucine and isoleucine degradation
rbi00650
Butanoate metabolism
rbi00907
Pinene, camphor and geraniol degradation
rbi01100
Metabolic pathways
rbi01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RB2501_11347
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RB2501_11347
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RB2501_11347
Enzymes [BR:
rbi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
RB2501_11347
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GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
EAR14918
UniProt:
A4CMM6
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Position
1761237..1762061
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AA seq
274 aa
AA seq
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MQGIREFIPTEAKIRYLQALLGCGFDTLDFGSFVSPRAIPQMADTAQVLSGLDLSRTSTR
LLAIVANVRGAEDAVRHPEIRYLGYPFSISENFQMRNTHKTIAESLKILTEILELARAHD
KEVVTYISMGFGNPYGDPWDAGIVSDWTRRLVDMGVGILSLSDTIGSSDPETISGLFSEL
IPAYPEVEFGAHLHTHPRSWKEKVQAAWESGCRRFDGAVQGFGGCPMAKDELTGNMPTEK
MLSFFTSRQVDTGVRWMAFEAAYNKATEIFTRYH
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagggaatccgggaatttatacctacggaagccaaaatccgctacctgcaggcactg
ctcggttgcggttttgataccctggatttcgggagctttgtctccccgagggcgatcccc
caaatggccgatacggcccaggtgctctccggcctggacctgagccgtacatccacccga
ctgctggccatcgtggcgaacgtgcggggggcggaggatgcggtgcgccatccggaaatc
cgttacctgggctatccgttttccatctcggaaaacttccagatgcgcaacacgcacaag
accatcgccgaatccctgaaaatcctgacggagatcctggaactcgcccgggcccacgac
aaagaggtggttacctatatttccatggggttcggcaacccctatggcgacccctgggat
gcgggtatcgtttcggattggactcggcggctcgtggatatgggggtggggatcctttcc
ctctccgataccatcggcagctcggatccggaaacgatttccggtctgttcagcgaattg
atccccgcctacccggaggtggaattcggagcccacctacacacgcatccccggagctgg
aaggaaaaagtgcaggcagcctgggaatccggatgtcgcaggtttgacggggcggtccag
ggctttgggggttgcccgatggccaaagacgaactcaccggcaatatgccgacggagaaa
atgctttcatttttcacctcccgccaggtggataccggggtccgctggatggccttcgag
gccgcctataataaggctaccgaaatcttcacccgctatcattga
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