Rhizobiales bacterium NRL2: TEF_05225
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Entry
TEF_05225 CDS
T04419
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rbm
Rhizobiales bacterium NRL2
Pathway
rbm00061
Fatty acid biosynthesis
rbm00071
Fatty acid degradation
rbm01100
Metabolic pathways
rbm01212
Fatty acid metabolism
rbm02024
Quorum sensing
Module
rbm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rbm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TEF_05225
00071 Fatty acid degradation
TEF_05225
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TEF_05225
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rbm01004
]
TEF_05225
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbm04147
]
TEF_05225
Enzymes [BR:
rbm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TEF_05225
Lipid biosynthesis proteins [BR:
rbm01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
TEF_05225
Exosome [BR:
rbm04147
]
Exosomal proteins
Exosomal proteins of breast milk
TEF_05225
Exosomal proteins of breast cancer cells
TEF_05225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ANK80258
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All DBs
Position
1128853..1130577
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AA seq
574 aa
AA seq
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MIGRTVLAEHPWLKSYPAGVQWDAPIETFPVYRILDDAVKAWPDSNALDFMGRKTTYAEL
SDMVDRAAKGFQALGVGPGVHVGLFLPNTPHYVVSFYGILKAGGTVVNYSPLDAAKELEH
KIEDSQTDIMVTLDLVALYPQMARMLGNTRLKKIITGSLTDVLPWPKNWLFPLAKGKEIA
KVPSDERHLTFRKLIANDGRFAPHQVANLDETVAVLQYTGGTTGLPKGAMLTHANLTAAT
SMYVTNNSAGERALEEGRERILAVLPLFHIYALQINMLLAMRFGAEIILHPRFELEAVMK
DLEAKNPTMFAGVPTMFNAIVNYPGIEKMDLSSLKFCASGGAPLPVEVAQKFEKLTGCKL
AEGWGMTETSPAGVSTPMEGKAKPGSCGIPMPGIELKFVDVDDPAKTLPMGERGEICIKG
ANVMKGYWNKPEENAKAFTEDGFFRTGDVGYMDEDGYLFIVDRTKDMILCGGFNVYPRNI
EEAIYQHPSVDEVSVIGIHDDYRGQSPKAFIKLKEGASGFTLEELKDFLKDKLGKHEMIS
DMDIRAELPKTLVGKLSKKELYEEEEKKRQAAAA
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgattgggaggaccgttttggccgagcatccgtggctcaaatcatacccggcgggcgtt
cagtgggacgcgccgatcgagacctttccggtctaccggatcctcgacgacgcggttaag
gcctggcccgacagcaacgccctcgacttcatgggcaggaagacgacctatgccgagctg
tccgacatggtcgaccgcgccgcgaaggggttccaggcgctgggtgtcggtcccggcgtg
catgtcggactgttcctgccgaataccccgcactacgtggtgagcttctacggcatcctg
aaggccggcggcacggtggtgaactattcgccgctcgatgccgcgaaggagctggagcac
aagatcgaggacagccagaccgacatcatggtcaccctcgatctggtcgcgctctacccg
cagatggccaggatgctgggcaatacccgcctgaagaagatcatcaccggcagcctgacc
gacgtgctgccctggccgaagaactggctgtttccgctcgccaagggcaaggagatcgcc
aaggtgccgtccgacgagcggcatctgacgttcaggaagctgatcgccaatgacggccgc
ttcgcccctcatcaggtggcgaacctggacgagacagtggcggtgctgcagtacaccggc
ggcaccaccggcctgcccaagggggcaatgctgacccacgccaacctgaccgcggccacc
agcatgtacgtgaccaacaattcggcgggcgagcgcgcgctggaggagggccgggagcgc
atcctggccgtgctgccgctgttccacatctacgccctgcagatcaacatgctgctggcc
atgcgcttcggcgcggagatcatcctgcatccgcgcttcgagctggaggcggtaatgaag
gatctggaggccaagaacccgaccatgttcgcgggcgtgccgaccatgttcaacgccatc
gtgaactatcccggcatcgagaagatggacctctcctcgctgaaattctgcgcatccggc
ggcgcgccgctgcccgtcgaggtggcgcagaagttcgagaagctcaccggctgcaagctg
gccgagggctggggcatgaccgagaccagccccgccggcgtctccacgccgatggagggc
aaggccaagcccggctcctgcggcattcccatgcccggcatcgagctcaagttcgtcgac
gttgacgacccggcgaagaccctgcccatgggcgagcgcggcgagatctgcatcaagggc
gccaatgtcatgaagggctactggaacaagcccgaggagaacgccaaggccttcaccgag
gacggtttcttccgcaccggcgacgtgggctacatggacgaggacggctatctgttcatc
gtcgaccgcaccaaggacatgatcctctgcggcggcttcaacgtctatccgcgcaacatc
gaggaagccatctaccagcacccctcggtcgacgaggtgtcggtgatcggcattcatgac
gactatcgcggccagtcgcccaaggccttcatcaagctgaaggaaggcgcctccggtttc
acgctggaggagctcaaggacttcctgaaggacaagctcggcaagcacgagatgatctcc
gacatggatatccgcgccgaactgcccaagaccctcgtcggcaagctctccaagaaggag
ctttacgaggaggaggagaagaagcgccaggccgccgcggcctga
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