Ruminococcaceae bacterium CPB6: B6259_03950
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Entry
B6259_03950 CDS
T04880
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rbp
Ruminococcaceae bacterium CPB6
Pathway
rbp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
B6259_03950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbp03400
]
B6259_03950
Enzymes [BR:
rbp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
B6259_03950
DNA repair and recombination proteins [BR:
rbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
B6259_03950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ARP50104
UniProt:
A0A1W6WD83
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Position
796691..797854
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AA seq
387 aa
AA seq
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MIPSCVLTVTQINLYVKSLLEGDEKLHCVYVTGEISNFTDHYRSGHLYFSLKDEKCAVKA
VMFASSARRLRFHPQNGIKVLVRGRISSYEVSGQYQLYVEEMQPVGAGERALAYEQLKEK
LRREGLFDAERKKELPRYPTKIGVITSPTGAVIHDIQNVTARRWPLAEILLYPVAVQGEG
AAPQLVQALQYFSSRSCADVLIIGRGGGSAEDLWAFNEEAVVRAVAACPLPVISAVGHET
DVTLTDFAADLRAPTPSAAAELAVPDGEKLKNALLQTAVSMHMGLENRLNDERMQLDLLS
QSLQEALEKPTQLRQQELGVLAGRLEDLNPLRVLRRGYSVVTSIDGQVLMSPEKIHTGEQ
VQVRMDQGTLLCTVDKKENLHESENDI
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgataccgagctgtgtgctgaccgtcacacaaatcaatctatatgtgaaatccctgctg
gaaggggacgaaaagcttcactgcgtttatgtgaccggagaaatcagcaactttacggac
cactaccgttccggccacttgtacttttccctaaaagacgaaaagtgcgcagtgaaggcg
gttatgttcgcttcctccgcccgccggctgcgttttcacccgcagaacggtataaaagta
ctggtgcgaggcagaatctcttcctatgaggtttccggacagtatcagctgtacgtggag
gagatgcagccggttggcgcgggggaacgcgcactggcctatgagcagctgaaagaaaag
ctccgccgagaaggtttgtttgatgcggagcgcaaaaaagaactgccccgttatcccacg
aaaatcggtgtgattacgtccccgaccggcgcggttatccacgacatacaaaatgtaaca
gccagacgttggccgctggcggaaattctcttgtatccggtcgctgtacagggagaaggg
gctgcaccgcagctggtgcaggcgctgcagtatttcagcagccgcagctgtgccgatgtc
ctgattatcggacgcggcggcggcagcgcggaagacctgtgggctttcaatgaagaagcg
gtcgtgcgggccgtagctgcctgtccgcttccggttatttccgcggtcggtcatgaaacg
gacgttacattgacggactttgccgcggacctgcgggcacctaccccaagtgctgcggcg
gaactggctgtgccggacggtgagaagctgaaaaacgcactgctgcaaacagcggtttct
atgcacatggggctggaaaaccgtctgaatgatgagcgtatgcagcttgacttattatcg
cagtccctgcaggaagcgctggaaaaaccgacacagctgcgccagcaggaactgggcgta
cttgcgggtcggctggaagatttgaatccgctgcgggtgctccgccgcggttattccgtt
gtgaccagcatagatggacaagtcctcatgagccctgaaaaaattcacacaggggagcag
gtacaggttcgtatggaccagggaacgctgctgtgtacagtagataaaaaggagaacctg
catgaatcagaaaatgacatttga
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