Rhodobiaceae bacterium SMS8: RHODOSMS8_01893
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Entry
RHODOSMS8_01893 CDS
T05596
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs00470
D-Amino acid metabolism
rbs00550
Peptidoglycan biosynthesis
rbs01100
Metabolic pathways
rbs01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RHODOSMS8_01893 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RHODOSMS8_01893 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RHODOSMS8_01893 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbs01011
]
RHODOSMS8_01893 (ddlB)
Enzymes [BR:
rbs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RHODOSMS8_01893 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
rbs01011
]
Precursor biosynthesis
Amino acid ligase
RHODOSMS8_01893 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATP-grasp
CPSase_L_D2
GARS_A
ATPgrasp_ST
TTL
Motif
Other DBs
NCBI-ProteinID:
AWZ01426
UniProt:
A0A2Z4UKL1
LinkDB
All DBs
Position
complement(1910830..1911747)
Genome browser
AA seq
305 aa
AA seq
DB search
MSEYKHIAVIKGGWSPEREVSLVSGRDCAEALRGEGFEVTEIDAGRDLAEQLLQIGPDAV
FNALHGRWGEDGCVQGLLEVLGIPYTHSGVRASAVAMDKEQSKHVFRAAGLPVAESKLVT
REEAARGHVMDTPYVIKPHNQGSSVGVFIVREGENRPPAELSSPKWDLGDVVMAERYIPG
MELTCAVIGNRVLNVTEITANTAFYDYDAKYSSGGSVHVVPARISSDINKRVQDVTHAAH
DSLGCRGVTRSDFRFDEKKGELVLLEVNTQPGMTPTSLVPELAAYEGMSYGALVRWMVED
ASCDR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtacaaacatatcgccgttatcaagggcggttggtcgcctgagcgagaagtg
agccttgtttctggtcgtgattgcgctgaagccctgcgtggagaagggtttgaggtcact
gagattgatgctggccgggatctggcggagcaattactccagatagggcctgacgctgtt
ttcaacgccctgcatggtcgctggggcgaggatggatgtgttcagggcctcctggaagtg
ctcggcattccctacactcattcgggtgttcgtgcgtcggctgtggccatggataaagag
caatccaagcatgtttttcgggcggcaggtctccccgtcgcagagagcaagcttgtgacg
cgggaagaagcggctcgtggccatgtcatggacacgccgtacgtgatcaagccccacaac
cagggctcgagtgtcggtgttttcattgttcgggaaggtgaaaaccgacctccagcagaa
ctctcttcaccgaaatgggacctcggtgatgtcgtgatggcggagcgctacatacccggt
atggaactcacctgcgcagtgatcggaaaccgagtcctaaatgtcacagagatcacagca
aacacagctttctacgactatgacgcaaaatattcgagtggtggctcggttcacgtagtg
cctgcccgaatcagttcggatataaataaacgtgttcaggacgtgacacatgcggcacat
gattcgcttggttgccggggggtaaccaggtcggatttccgtttcgatgaaaagaaaggg
gagctcgttctgttagaggtcaatacgcagcccggcatgacgccgacgtcgttggttccc
gaactcgcggcgtatgaaggaatgtcatatggcgcgcttgtccgttggatggtggaggac
gcgtcatgcgatcggtaa
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