Rhodobiaceae bacterium SMS8: RHODOSMS8_02913
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Entry
RHODOSMS8_02913 CDS
T05596
Symbol
ytlP
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rbs03016
]
RHODOSMS8_02913 (ytlP)
Enzymes [BR:
rbs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
RHODOSMS8_02913 (ytlP)
Transfer RNA biogenesis [BR:
rbs03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
RHODOSMS8_02913 (ytlP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Corona_NS2A
Motif
Other DBs
NCBI-ProteinID:
AWZ02427
UniProt:
A0A2Z4UML8
LinkDB
All DBs
Position
2942174..2942737
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AA seq
187 aa
AA seq
DB search
MIRLFTALEIPASASDHLCTLQSGLQNARWISPENFHITLRFIGDVSEDMAFEIDEALSH
MKADPFDLHLSGLGSFGHSKPHALWAGVAESEPLRALHAKQETAMQKLGLKAEPRKYTPH
VTIARLNKRATNAGDVMHYIEHRNLFSTPPFEVTQFVLFSARNSKGGGPYVAERTYDLEE
QAHAVGS
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgatacgccttttcactgccctcgaaattccagcttccgcctccgaccacctctgcacc
cttcaatcaggattgcagaatgcccgctggatcagcccagaaaattttcacatcacactg
cgcttcatcggcgatgtctcagaggacatggccttcgagattgatgaagccctttcgcac
atgaaggcagacccctttgacttgcatctaagtgggctaggctcttttggccactcaaaa
ccccatgccctgtgggcaggtgttgccgaaagcgaacccttgcgcgcattgcacgcaaag
caggaaaccgcgatgcaaaaactggggctaaaagcagaaccgcgcaaatacacacctcac
gtaacgatcgcgcgcctcaacaagcgcgcaaccaatgcaggcgacgtgatgcactatatt
gagcatcgcaatctcttttcgacgccaccatttgaggtgacgcaattcgtgctcttttcc
gcccgcaatagcaaaggcggcgggccttatgtggccgaacgcacctatgatctggaagag
caggcccacgccgtcgggtcttga
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