Rhodobiaceae bacterium SMS8: RHODOSMS8_03488
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Entry
RHODOSMS8_03488 CDS
T05596
Symbol
phrA
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbs03400
]
RHODOSMS8_03488 (phrA)
Enzymes [BR:
rbs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RHODOSMS8_03488 (phrA)
DNA repair and recombination proteins [BR:
rbs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RHODOSMS8_03488 (phrA)
Prokaryotic type
RHODOSMS8_03488 (phrA)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AWZ02993
UniProt:
A0A2Z4UPF1
LinkDB
All DBs
Position
complement(3553133..3554572)
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AA seq
479 aa
AA seq
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MSPTLVLFHTNLRVGDNPALTSAAESGPVVPVFVLDESFGRALGGASRWWLHRSLQSLAT
RLADLGAPLILRQGDLIDEVSELVQETGATRVFLQHGYDPSVQKGETALHEWGVKSDVEI
KRFAGQVLFPPETIRTQQDKPYTVFSPYWRTCLKQVSFGPLVRCDRLTPVAEQPRSLKLE
ELRLLPSGFDWTPSLADTFIPGEAQALETLDTYLDDGLRSYKEMRDHPGHSPGTSKLSAH
LRFGEISPRTIWQRTQDAIARNPDLARDGEWFLRELGWRDFSYHLLHHFPSLPTAPLRPA
FDDFPWNQGPSRELTSWQKGLTGFPIVDAGMRQLWQTGWMHNRVRMIVASFLVKELLIHW
REGEAWFWDTLVDADPASNTASWQWVAGCGADAAPYFRIFNPVLQGEKFDADGAYVTRFV
PELAKLPKKYLHKPWEAPAHVLEEACLKLGQDYPLPIVDRKQARARALEAFQSIKAKKP
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagccccacactcgtcctctttcacaccaaccttcgggtcggcgacaacccagcactc
acttccgctgcggaatcaggaccggttgtgcctgtatttgtgctcgatgagagttttggg
cgggctctgggaggcgcttcgcgctggtggctgcatcgctcgcttcaatctctggcaacc
agactggcagatctgggcgccccgctcatccttcgccagggtgacctgattgacgaagtg
tcagagctggttcaggaaacgggagcaacccgcgtctttctgcaacatggctacgaccct
tccgttcagaaaggcgagacggcgcttcatgaatggggcgtcaagtctgacgtggagatt
aaacggtttgcgggtcaggttctttttccaccagagacaatccggacacaacaggacaag
ccctacacggtcttttcgccttattggcggacctgcctgaagcaggtgagcttcgggccg
ctggtgcgatgcgacaggctcacgccggtggccgagcagccgcgctccctcaagttggaa
gagcttcgcctgcttcccagtggctttgattggacgcctagcctcgccgacaccttcata
cccggtgaggcccaagccttagagacacttgatacttaccttgatgacgggctccgctcc
tacaaggagatgcgcgaccatccgggccactcacccggcacatcgaagctttcagcgcat
cttcggtttggagaaatcagcccgcgcaccatctggcaacgtacacaggacgccatagcg
cggaacccggatcttgcccgtgacggggagtggttcctacgcgagcttggctggcgcgat
ttttcctatcatctcctccatcacttcccttcattgcctaccgcgccgctgcggcccgcg
tttgacgacttcccctggaaccaaggcccaagtagggagcttaccagctggcaaaaaggg
ctcaccggctttcccattgttgatgcaggcatgcgccagctctggcagaccggctggatg
cataatcgggtgcgaatgatcgttgcctccttcctggtgaaagaactgctcattcactgg
cgagagggggaagcgtggttctgggacacgctggtggatgcggacccggcaagcaatacg
gccagttggcaatgggtggcagggtgtggtgcagatgcggcgccctatttccgaattttc
aatccggtcttgcagggagaaaagtttgatgccgatggggcctatgtgacccgatttgtg
ccggagcttgcaaagcttccgaaaaaatatctgcacaaaccgtgggaagcgcctgctcat
gttctagaagaggcctgcctaaagcttggtcaggattacccgcttccaattgttgaccgg
aaacaggcccgggcccgcgcccttgaggcatttcagtccataaaggccaaaaaaccgtaa
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