KEGG   Rugosibacter aromaticivorans: PG1C_06695
Entry
PG1C_06695        CDS       T03689                                 
Name
(GenBank) DNA polymerase III
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
rbu  Rugosibacter aromaticivorans
Pathway
rbu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rbu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PG1C_06695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rbu03400]
    PG1C_06695
Enzymes [BR:rbu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     PG1C_06695
DNA repair and recombination proteins [BR:rbu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     PG1C_06695
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AJP48232
UniProt: A0A0C5IZL3
LinkDB
Position
1379716..1380441
AA seq 241 aa
MKPSRDQILREMGLGPVWKLRKAPQVVSGLSEPETAATIPAVVDNAPLSIKNLDWESLAA
TVSACRQCRLCEARKQAVLGVGDSQADWLFVGEGPGAEEDERGEPFVGQAGQLLDNMLAS
IDLQRGRDVYIANAVKCRPPKNRTPDHDEIAACRPYLAQQIALIQPKLIVAMGRPAAQAL
LQAEVKISAARGKLHDYERERIPVIVTYHPAYLLRNLLDKAKAWEDLCFMRSTMRQLKAH
P
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaaacctagtcgagatcagatactgcgcgaaatggggctggggccggtgtggaaactt
cgcaaggcgccacaggtggtgtccgggctatctgagcccgagacagcagccaccatccct
gcggtagtcgataacgcgccattgtcgatcaaaaacctcgactgggaatccttggcggct
acggtttcggcgtgtcgccagtgccgactttgtgaggcgcgcaaacaagccgttttaggc
gtaggtgacagccaagctgactggctttttgtcggtgaaggaccaggcgcggaagaagat
gagcgcggcgagccttttgtaggtcaggcaggccagttgcttgacaatatgttggcctcg
attgatctgcagcgcgggcgggatgtttatatcgcgaatgccgttaaatgtcgcccgccg
aaaaatcgaacacctgatcacgacgaaattgcagcctgtcggccttatcttgcacaacag
attgccttgatccagccaaaactcattgtagccatgggccgacccgccgcgcaggcgctg
ctgcaggccgaagtaaaaatcagcgctgcccgtggaaagttgcatgactatgagcgtgag
cgcattccagtgatcgtcacctaccacccggcctatctgttgcgcaatcttctcgacaaa
gccaaggcatgggaagatctttgctttatgcgcagtacgatgcgccaattaaaagcacac
ccataa

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