Rugosibacter aromaticivorans: PG1C_09960
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Entry
PG1C_09960 CDS
T03689
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rbu
Rugosibacter aromaticivorans
Pathway
rbu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PG1C_09960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbu03019
]
PG1C_09960
Enzymes [BR:
rbu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PG1C_09960
Messenger RNA biogenesis [BR:
rbu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PG1C_09960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AJP49590
UniProt:
A0A0C5JCQ4
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All DBs
Position
complement(2033268..2034644)
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AA seq
458 aa
AA seq
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MIRKLFHRVFRRGSPLPSGKPGLIPLARHGIHRERVSPGARRTCETLQKAGYTAYVVGGA
VRDLIAGIEPKDYDIATNATPEQVRSLFRRSRIIGRRFQIVHVMQGNETLEVSTFRAAHD
AETVKDEHGRVLRDNVFGSMAEDAARRDFTVNALYYDPTTQMVHDYHHGVADLKQKTLRM
IGEPTVRYREDPVRMLRAVRLSAKLGLTLDPAVRAPIREMAGLMENVPAARVFDEMLKLL
FSGHAVECVKRLRDDGLHHGLLPLLDVILEQPLGEKFVLLALTSTDARVKAGKSLSPGYL
FATLLWHEVLANWEARKARCELPTPALYEAMDEVLDLQGEKLAITRRIAGDIKEIWALQP
RFEKRAGKSPHRLLEQARFRAAYDFLALRAESGEIDQELATWWHDFQMADLAEREAMLLP
ESGPKKRRSRSRTKKITGNSTDGEGDFTAPAASANPEA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtaagctgtttcaccgcgtttttcgtcgcggtagcccgctgccttctggtaag
ccggggttgattcctcttgctcgccacggtatccaccgtgagcgcgtttcgcctggcgcg
cggcgcacgtgtgagactctccaaaaagctggctacacggcgtatgtggtgggcggtgcg
gtgcgtgatttgatcgcaggcattgagccgaaggattacgatatcgccaccaatgccacg
ccggaacaggtgcggagtttatttcgccgctcacgcattattggccgccggtttcagatt
gtgcatgtgatgcaaggcaatgaaacactcgaagtttccacctttcgcgccgcgcatgat
gcggagacagtcaaggatgagcatggtcgcgtgttgcgcgataacgtgttcggctcaatg
gcagaagatgccgcgcggcgcgatttcactgtgaatgcgctgtactacgatcccacgacg
caaatggtgcacgattaccatcatggtgtagcagatttgaagcaaaaaacactgcgcatg
atcggcgagccgaccgtgcgctaccgtgaagaccctgtgcgcatgctgcgcgcagtgcgg
ctttccgccaagctggggttgacgcttgaccctgctgtgcgcgcgccgatccgcgaaatg
gccggactgatggaaaacgtaccggcggcgcgggtgtttgacgagatgttgaagttgctc
ttttccggccatgccgtggaatgcgtcaagcgcttgcgcgatgatgggttgcatcacggt
ttgttgccgctgctggatgtgattctcgaacagccgctgggcgaaaaatttgttttgctg
gctttaacgagcaccgatgcgcgcgtcaaggcgggcaagtcgctctcgccgggttacctg
tttgccacactgctgtggcacgaagtgctggccaattgggaagcacgcaaagcgcgttgc
gaactgcctacgccggcgctttatgaggcgatggatgaagtgcttgatctgcagggcgag
aagctcgccatcacacgccgcatcgcgggtgacatcaaggaaatatgggctttgcagccg
cgctttgaaaaacgtgctggaaaatcgccccatcgtttgctggagcaggcacgctttcgc
gcggcctacgattttttagccttgcgcgcagaaagtggcgagattgaccaagagctcgcc
acctggtggcacgattttcaaatggctgatcttgccgagcgcgaggccatgctcttgccc
gagagcgggccgaaaaaacgccgcagccgcagccgcaccaaaaagatcacaggtaactcg
accgatggggagggcgatttcactgcgcccgccgccagtgccaatcccgaagcgtaa
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