Rhodococcus pyridinivorans TG9: CEJ39_02965
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Entry
CEJ39_02965 CDS
T05830
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rby
Rhodococcus pyridinivorans TG9
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rby03032
]
CEJ39_02965 (gyrB)
03400 DNA repair and recombination proteins [BR:
rby03400
]
CEJ39_02965 (gyrB)
Enzymes [BR:
rby01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CEJ39_02965 (gyrB)
DNA replication proteins [BR:
rby03032
]
Prokaryotic type
DNA Topoisomerases
CEJ39_02965 (gyrB)
DNA repair and recombination proteins [BR:
rby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CEJ39_02965 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AWZ23274
LinkDB
All DBs
Position
616008..618044
Genome browser
AA seq
678 aa
AA seq
DB search
MAAQKSNNNKSEYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMA
GYASKVEVTLLADGGVQVVDDGRGIPVGMHASGVPTVEVVLTQLHAGGKFDSDAYAVSGG
LHGVGISVVNALSTTLEVEIDNDGYHWEQTYTASKPGELVRGEATKQTGTTVRFWPDPEI
FETTTFNFETVARRLQEMAFLNKGLTITLTDERVAPEEVTDEDVPETAEAPKTAEDQAVE
ATEPEVHKVKVRTYHYPGGLEDYVRHINRTKSPIHNSVVGFTAKGTGHELEVAMQWNSGY
SESVHTFANTINTHEGGTHEEGFRAALTTVVNRYAKDKKLLKDKDPNLTGDDIREGLAAI
ISVKVAEPQFEGQTKTKLGNTEVKSFVQKACNEHISHWFEANPADAKTIVTKAVSSAHAR
VAARKARELVRRKSATDIGGLPGKLADCRSKDPSKCEIYIVEGDSAGGSAKSGRDSMYQA
ILPLRGKIINVEKARIDKVLKNAEVQSIITAFGTGIHEEFDISKLRYHKIVLMADADVDG
QHIATLLLTLLFRFMRPLVEEGHVFLAQPPLYKLKWQRSEPEFAYSDRERDALLEAGLKA
GKRINKDDGIQRYKGLGEMNAKELWETTMDPSVRVLRQVTLDDAAAADELFSVLMGEDVA
ARRSFITRNAKDVRFLDV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcccagaagtcgaacaacaacaagagtgagtacggtgcgtcgtccatcaccgtc
ctcgagggtctcgaggcggtgcgcaagcgccccggtatgtacatcggttccaccggagag
cgtggcctgcaccacctgatctgggaggtcgtcgacaactccgtcgacgaggccatggcc
ggttacgcgtcgaaggtggaggtcaccctcctcgccgacggcggtgtccaggtcgtcgac
gacggtcgcggtatccccgtcggtatgcacgcctccggtgtgcccactgtcgaggtcgtc
ctcacccagctccacgcgggtggcaagttcgactccgatgcctacgccgtctccggcggt
ctgcacggtgtcggtatctccgtggtgaacgccctgtccacaaccctcgaggtcgagatc
gacaacgacggctaccactgggagcagacgtacaccgcctcgaagccgggcgagctcgtc
cgcggtgaggccaccaagcagaccggtaccaccgtccgcttctggccggacccggagatc
ttcgagaccacgacgttcaacttcgagaccgtcgcgcgtcgcctgcaggagatggcgttc
ctcaacaagggactgaccatcactctcaccgacgagcgggtcgctcccgaagaggtcacc
gacgaggacgtcccggagaccgccgaggcgccgaagaccgccgaggaccaggccgtcgag
gcaaccgagcccgaggtgcacaaggtcaaggtccgcacctaccactacccgggtggtctc
gaggactacgtgcgccacatcaaccgcacgaagtcgccgatccacaactccgtcgtcggg
ttcaccgccaagggcaccggccacgaactcgaggtcgcgatgcagtggaactcgggttac
tccgagtccgtccacaccttcgccaacaccatcaacacccacgagggcggtacgcacgag
gaaggcttccgtgcggcgctgaccacggtcgtcaaccgctacgcgaaggacaagaaactc
ctcaaggacaaggacccgaacctcacgggtgacgacatccgtgagggtctcgcggcgatc
atctccgtcaaggtcgctgagccgcagttcgagggccagacgaagaccaagctcggcaac
accgaggtgaagtccttcgtgcagaaggcgtgcaacgagcacatctcgcactggttcgag
gccaacccggccgacgcgaagacgatcgtcaccaaggccgtgtcgtcggcgcacgcgcgt
gtcgccgctcgtaaggcgcgcgagctcgtccgccgcaagagcgcgaccgacatcggtggt
ctgcccggcaagctcgccgactgccggtcgaaggacccgagcaagtgtgagatctacatc
gtggagggcgactccgcgggtggctccgccaagtcgggtcgcgactcgatgtaccaggcg
atccttccgctgcgcggcaagatcatcaacgtcgagaaggcccggatcgacaaggtcctc
aagaacgccgaggtccagtcgatcatcacggcgttcggtaccggcatccacgaggaattc
gacatctcgaagctgcggtatcacaagatcgtcctgatggccgacgccgacgtcgacggt
cagcacatcgcgacgctgctgctcacgctgctcttccgcttcatgcggccgctggtcgag
gaaggccacgtcttcctggcacagccgccgctgtacaagctcaagtggcagcgcagcgag
ccggagttcgcgtactccgaccgcgagcgcgacgccctgctcgaggcgggtctgaaggcc
ggcaagaggatcaacaaggacgacggcatccagcgctacaagggcctcggtgaaatgaac
gccaaagaactgtgggagaccaccatggatccgagcgtccgcgtcctgcgtcaggtgacc
cttgacgacgccgctgccgccgacgagctgttcagcgttctgatgggtgaggacgtcgcg
gcacgacggagcttcatcacccgtaacgcgaaggatgtccgcttcctcgacgtctga
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