Rhodococcus pyridinivorans TG9: CEJ39_13205
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Entry
CEJ39_13205 CDS
T05830
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
rby
Rhodococcus pyridinivorans TG9
Pathway
rby03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CEJ39_13205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rby03400
]
CEJ39_13205
DNA repair and recombination proteins [BR:
rby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CEJ39_13205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
GIY-YIG
HHH_2
UVR
HHH
HHH_3
UPF0758_N
GIY_YIG_domain
Motif
Other DBs
NCBI-ProteinID:
AWZ25014
LinkDB
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Position
2801254..2803467
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AA seq
737 aa
AA seq
DB search
MPDPSTYRPAPGSIPTEPGVYKFRDPHGRVVYVGKAKNLRSRLNSYFADIASLHPRTRQM
VTTAGRVEWTVVRTEVEALQLEYNWIKEFDPRFNVRYRDDKTYPMLAVTLNEEYPRLFVY
RGPRRKGVRYFGPYSHAWAIRETLDLLLRVFPSRTCSAGVFKRHAQIGRPCLLGYIDKCS
APCVGRVSADEHRRIVEDFCDFLAGRTDKLVRDVEKRMQDAAEELDFETAARLRDDLGAL
RKALEKQAVVLGDGTDADLVAFAGDDLEVAVQVFHVRGGRVRGQRGWVVEKSGDVLDRPE
DRDVEGVEAAEGTDDAEELSLLVEQFLTQFYGEEAALGTDDADATSAVPREVLVPALPPD
PDEMSRWLGRLRGGPVRLRIPQRGDKKALADTVERNAKEALAQHKLRRAGDFNARSAALQ
GIQDVLDLDSAPLRIECVDISHVQGTDVVASLVVFEDGLPRKSDYRHYAIKHAAGDGHSD
DVASIAEVTRRRFLRHNRDLARQADSDGSVPEGGDGGDLAPEAALDPATGRPRRFAYPPN
LFVVDGGAPQVAAAAEVLDELGITDVAVVGLAKRLEEVWVPGEEDPVILPRTSESLYLLQ
RIRDEAHRFAITYHRSKRSKRMTASALDGVRGLGDTRRKALVTHFGSVARLREASVEEIT
AVPGIGQATAKAVLEALRGDVPAPAESPHDTDAPTVADASDPAAAPAGDPTAADAGDTPV
GDDGSVGVSGVRAESEQ
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacccctcgacatatcgcccagcccccggttccattcccacggagccgggggtc
tacaagttccgcgacccgcacggccgggtcgtctacgtcggcaaggcgaagaatctccgg
tcccgcctgaactcgtacttcgccgacatcgcctcgctgcatccgcgcacccgtcagatg
gtgaccaccgcgggccgggtcgagtggacggtggtgcgcaccgaggtcgaggcactccaa
ctcgagtacaactggatcaaggagttcgatccgcggttcaacgtccgctaccgcgacgac
aagacgtacccgatgctcgcggtcacgttgaacgaggaatacccccgtctgttcgtctac
cgggggccgcgccgcaagggcgtgcgctatttcggtccctactcgcatgcctgggcgatc
cgcgagaccctcgacctgttgctacgggtgttcccgtcgcgcacgtgctcggccggggtc
ttcaagcggcacgcgcagatcggccgcccgtgcctgctcggctacatcgacaaatgctcc
gcgccgtgtgtcggacgcgtctccgccgacgaacaccgccgcatcgtcgaggacttctgc
gacttcctcgccggtcgcaccgacaaactcgtccgcgatgtcgagaagcggatgcaggac
gccgcggaggaactcgacttcgagaccgcagcccgcctgcgcgacgatctcggggcactg
cgcaaggcactcgagaagcaggccgtcgtgctcggcgacggtaccgacgccgacctcgtg
gcgttcgccggcgacgacctcgaggtggccgtccaggtctttcacgtgcgcggcggtcgc
gtgcggggtcaacgcggctgggtcgtcgagaagtccggcgacgtgctcgaccgtcccgag
gaccgcgacgtcgaaggcgtcgaggccgccgaggggaccgacgacgccgaagaactctcg
ctgctcgtcgaacagttcctcacccagttctacggcgaggaggccgcgctcggcaccgac
gacgcggacgccaccagtgccgtgccgcgcgaggtgctcgtccccgccctgccgcccgac
ccggacgagatgagccgctggctcgggcgtctgcgcggcggtcccgtgcgtctgcgcatc
ccgcagcgcggcgacaagaaggcactggccgacacggtcgaacgcaacgccaaggaagca
cttgcccagcacaagctgcggcgcgcgggcgacttcaatgcccgatcggcggcgttgcag
ggtatccaggacgtcctcgacctcgactcggcgccgctgcgtatcgagtgtgtcgacatc
agccacgtgcagggcaccgacgtcgtcgcatcgctggtcgtcttcgaggacggactgccc
cgcaagtccgactaccggcactacgccatcaagcacgccgcgggcgacgggcactccgac
gacgtcgcctcgatcgccgaggtcacccgccggcgtttcctccgccacaaccgcgacctc
gcccgacaggccgattcggacggatccgttccggagggtggcgacggcggggacctcgcg
cccgaagcagcactggacccggcgacgggccgtccgcgcaggttcgcctacccgccgaac
ctgttcgtcgtcgacggtggtgcgccgcaggtcgcggccgcggccgaggtcctcgacgaa
ctcggtatcacggatgtcgcggtcgtcgggctcgcgaagcgtctcgaggaggtgtgggtg
ccgggggaggaggacccggtgatccttccgcgcaccagcgagtcgctgtacctgctgcag
cgtatccgcgacgaggcacaccgtttcgcgatcacctaccaccgcagcaagcggtccaag
cgcatgaccgcctccgctctcgacggggttcgtggtctcggcgacacccgacgcaaggcg
ctcgtcacccacttcgggtcggtcgcgcggctacgcgaggcgagcgtcgaggagatcacc
gcggtgcccgggatcgggcaggccacggcgaaagccgtcctcgaggcgctgcggggcgac
gtaccggctccggccgagtcgccgcacgacaccgacgccccgaccgtcgcggatgcgagc
gatccggctgcggcacctgcgggtgacccgacggccgcggatgcgggcgacacgcccgta
ggcgatgatggctccgtcggcgtgtcgggagtacgagcggagtcggaacagtga
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