Rhodococcus pyridinivorans TG9: CEJ39_13375
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Entry
CEJ39_13375 CDS
T05830
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rby
Rhodococcus pyridinivorans TG9
Pathway
rby03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CEJ39_13375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rby03400
]
CEJ39_13375
DNA repair and recombination proteins [BR:
rby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CEJ39_13375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
TF_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
AWZ25043
LinkDB
All DBs
Position
complement(2839540..2840574)
Genome browser
AA seq
344 aa
AA seq
DB search
MRSIWKGSLAFGLVNVPVKVYSATESHDISFHQVHAKDGGRIKYQRVCTECGEVVPYQEI
DKAYDSEDGERVVLTDEDFEKLPAAEKHEIPVLQFVPTEQIDPILFEKSYYLEPDSSSPK
AYGLLAATLEQSDRTALVHFTLRQRTRLAALRTRDGLLILQTLLWPDEVRAAEFESLDDI
EKPKQRELAMAETLVESMSDDFDPTEFTDEYQVELRTLIDEALARGGEKVFQVAEHDTGE
EDAEVLDLVAALQRSVDAAGKKVPSGSSSGGKKSSKNDEDEDEDAKKAPAKKTASKSSAA
KKSPAKKSTAKKTASKSSASKSTAKKSPAKKTAAKKTSGERKGA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcgatctggaaaggctcactcgcgttcggcctcgtcaacgtgccggtgaaggtg
tactcggcgaccgagtcgcacgacatctccttccaccaggtgcacgcgaaggacggtgga
cggatcaagtatcagcgtgtgtgtaccgagtgcggggaggtcgtcccctaccaggagatc
gacaaggcgtacgactccgaggacggcgagcgggtcgtgctcaccgacgaggacttcgag
aaactccccgccgccgagaagcacgagattccggtgctgcagttcgtgcccaccgagcag
atcgacccgatcctgttcgagaagtcctactatctcgaacccgattcgtcgtcgccgaag
gcctacggcctgctcgccgcgactctcgagcagagcgaccggacggcgctggtgcatttc
acccttcgtcagcgcacccggctggcggccttgcgtacccgtgacggtctgctcatcctg
cagaccctgctgtggcccgacgaggttcgcgcagccgagttcgagtcgctcgacgacatc
gagaagccgaagcaacgcgaactcgcgatggccgagaccctcgtcgagtcgatgtccgac
gatttcgatcccaccgagttcaccgacgagtaccaggtggaactgcgcacgctgatcgac
gaggccctcgcccgcggcggcgagaaggtcttccaggtcgccgaacacgacaccggcgaa
gaggacgccgaggtgctcgacctcgtggcggccctgcagcgcagcgtcgacgcggcgggc
aagaaggtcccgtccggttcgtcctccggcgggaagaagtcctcgaagaatgacgaggat
gaagacgaggacgcgaagaaggcccccgcgaagaaaacggcgtcgaagagttcggcggcc
aagaagagtcccgccaagaagagcacggcgaagaagaccgcgtctaagagttcggcgtcg
aagagcacggcgaagaagagtcctgccaagaagacggccgccaagaagacctccggcgaa
cgcaaaggcgcctga
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