KEGG   Rhodococcus pyridinivorans TG9: CEJ39_13375
Entry
CEJ39_13375       CDS       T05830                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
rby  Rhodococcus pyridinivorans TG9
Pathway
rby03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rby00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CEJ39_13375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rby03400]
    CEJ39_13375
DNA repair and recombination proteins [BR:rby03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CEJ39_13375
SSDB
Motif
Pfam: Ku HC2 TF_Zn_Ribbon
Other DBs
NCBI-ProteinID: AWZ25043
LinkDB
Position
complement(2839540..2840574)
AA seq 344 aa
MRSIWKGSLAFGLVNVPVKVYSATESHDISFHQVHAKDGGRIKYQRVCTECGEVVPYQEI
DKAYDSEDGERVVLTDEDFEKLPAAEKHEIPVLQFVPTEQIDPILFEKSYYLEPDSSSPK
AYGLLAATLEQSDRTALVHFTLRQRTRLAALRTRDGLLILQTLLWPDEVRAAEFESLDDI
EKPKQRELAMAETLVESMSDDFDPTEFTDEYQVELRTLIDEALARGGEKVFQVAEHDTGE
EDAEVLDLVAALQRSVDAAGKKVPSGSSSGGKKSSKNDEDEDEDAKKAPAKKTASKSSAA
KKSPAKKSTAKKTASKSSASKSTAKKSPAKKTAAKKTSGERKGA
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgcggtcgatctggaaaggctcactcgcgttcggcctcgtcaacgtgccggtgaaggtg
tactcggcgaccgagtcgcacgacatctccttccaccaggtgcacgcgaaggacggtgga
cggatcaagtatcagcgtgtgtgtaccgagtgcggggaggtcgtcccctaccaggagatc
gacaaggcgtacgactccgaggacggcgagcgggtcgtgctcaccgacgaggacttcgag
aaactccccgccgccgagaagcacgagattccggtgctgcagttcgtgcccaccgagcag
atcgacccgatcctgttcgagaagtcctactatctcgaacccgattcgtcgtcgccgaag
gcctacggcctgctcgccgcgactctcgagcagagcgaccggacggcgctggtgcatttc
acccttcgtcagcgcacccggctggcggccttgcgtacccgtgacggtctgctcatcctg
cagaccctgctgtggcccgacgaggttcgcgcagccgagttcgagtcgctcgacgacatc
gagaagccgaagcaacgcgaactcgcgatggccgagaccctcgtcgagtcgatgtccgac
gatttcgatcccaccgagttcaccgacgagtaccaggtggaactgcgcacgctgatcgac
gaggccctcgcccgcggcggcgagaaggtcttccaggtcgccgaacacgacaccggcgaa
gaggacgccgaggtgctcgacctcgtggcggccctgcagcgcagcgtcgacgcggcgggc
aagaaggtcccgtccggttcgtcctccggcgggaagaagtcctcgaagaatgacgaggat
gaagacgaggacgcgaagaaggcccccgcgaagaaaacggcgtcgaagagttcggcggcc
aagaagagtcccgccaagaagagcacggcgaagaagaccgcgtctaagagttcggcgtcg
aagagcacggcgaagaagagtcctgccaagaagacggccgccaagaagacctccggcgaa
cgcaaaggcgcctga

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