Aestuarium zhoushanense: B9057_08735
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Entry
B9057_08735 CDS
T05514
Name
(GenBank) MBL fold hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
rbz
Aestuarium zhoushanense
Pathway
rbz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B9057_08735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbz03019
]
B9057_08735
Messenger RNA biogenesis [BR:
rbz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B9057_08735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
AUJ64383
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All DBs
Position
complement(1754771..1756438)
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AA seq
555 aa
AA seq
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MSSERLIYLPLGGAGEIGMNAYVYGYGAPDKERLIVVDLGVTFPDMDGSPGVDLIFPDIT
WLEERKDQIEGIFITHAHEDHVGAVGLLWERLGAPIYARTFTANIATRKLSEKHLPEGIV
RTVGAYPAVTKCGPFTVSVVPMSHSIPESGGLLIETPNDRVFHSGDFKIDKTPVVGEPFD
EDMLSEIAKGGIKALVCDSTNVFSEHAGRSEAELAKPLQALIEEQKGMVVATTFASNIAR
LKTLAVAAQNAGRSICLLGRAMRRMVEAGIETGILSDFPSVISPEDAASIPRENVMLLVT
GSQGERRAASAQLSQGKYLGLSLKEGDTFIFSSKTIPGNERGVIRIMNALSEKGVEVIDD
RGGLYHVSGHANRPDLKKLHQIMQPQMLIPMHGEHRHLREHVKLGAESGITGVIAVNGTM
VNLSGNRPEVCGYVETGRTYLDGSVQIGALDGIVRDRIRMALNGHVTATLIIDEHDEPLG
DPWCELMGLPEMGRNNAPLVDVLEEDLSQFINRADDKTLLDDDELETQLRRIIRNSCQNE
IGKKPEVTIIISRLN
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgaacgactgatttacctgccgctcggtggcgcgggcgagatcggcatgaac
gcctatgtctacggatatggcgcaccagataaggaacgtctgatcgttgtcgatctcggt
gtgaccttccccgatatggatgggagccccggtgtcgacctgattttccctgatatcacg
tggctcgaagagcgtaaggatcagatcgaagggatttttatcacccacgcgcacgaggac
cacgtgggggccgttggcctcttgtgggaacgcctcggagcgccgatctatgcgcggacc
ttcaccgcgaatatcgcgacccgcaagctgtccgaaaaacacctgcccgaaggcatcgtg
cgcaccgtaggtgcctatcctgcggtcacgaaatgcggcccgtttaccgtttcggtcgtg
ccgatgagccactccatcccagagagcggcggtctgttgatcgaaacgcctaacgaccgt
gtgttccactctggcgacttcaagatcgacaaaacgcctgtcgttggtgaaccctttgac
gaggatatgctgtctgaaatcgcaaagggcggcatcaaggcgcttgtgtgcgattccacc
aacgtgttttccgaacacgcagggcggagcgaggctgagctcgccaaaccgctccaggcg
ctgatcgaagagcaaaaaggcatggtcgttgcgaccacctttgcgtcgaacatcgcgcgt
ttgaaaacgctggctgttgccgcgcaaaacgcgggtcggtcgatctgtctcttgggtcgt
gcaatgcgtcggatggtcgaggcagggattgagacaggtatcctgtcggacttcccatcg
gtcatttcgcccgaagatgcggcgagcatcccgcgcgaaaacgtcatgctgctggtcact
ggctcccaaggtgaacgccgcgcggcctctgcccaactgtctcaaggtaaatacctcggc
ctgtcgctcaaagagggcgatacgttcatcttttcgtccaagaccatcccaggcaacgaa
cgtggtgtgatccgcatcatgaacgcgctgtcggaaaagggggttgaggtgattgatgac
cgtggtggcctctaccacgtatcgggtcacgcgaaccgtcctgatctgaagaaactgcac
cagatcatgcagccacaaatgctgatcccaatgcacggtgaacaccgccacctgcgcgaa
catgtaaagctgggcgcggaaagcgggatcacaggcgtgattgcggtaaacggcacaatg
gtgaacttgtcaggcaatcgccctgaggtttgcggctatgtcgaaacgggccgcacctat
ttggacggttcggtgcagattggtgcgctggatggcatcgtgcgcgaccgtatccgcatg
gcgctgaacggtcatgtgaccgcgacgttgatcatcgatgaacatgatgagccgctgggc
gatccgtggtgcgaactgatggggcttcctgaaatgggtcgcaacaacgcgccgctcgtt
gatgttctcgaagaggacctgagccagttcattaaccgcgccgatgacaagacgctcttg
gatgatgatgaattggaaactcagctgcgccgtatcattcggaattcgtgccagaatgag
attggtaaaaagccggaagtgacgatcatcatcagccgattgaactga
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