Roseiflexus castenholzii: Rcas_0471
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Entry
Rcas_0471 CDS
T00585
Name
(GenBank) conserved repeat domain
Organism
rca
Roseiflexus castenholzii
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
Integrin_A_Ig_3
CARDB
Motif
Other DBs
NCBI-ProteinID:
ABU56602
UniProt:
A7NGL2
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Position
608494..611673
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AA seq
1059 aa
AA seq
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MRRNIAVLWLLGFLGGLLVFAPPTGRTPVAHATVPNEQNWTVTPGTCDPSFQGAVFAAWN
PASGNPNCGVFTSGAPSLNQFDTGQVFPPNVLRDEASVTAPCENGRTAGLCYRMWYVGTR
SGEPYRRIGYAVSPDGVSWYRVQGPHTGGSVFEGSGQPGSFDENGATTFHVIKDGGEYRM
WYTGVNSSGTWRGFGYATSNNGITWTRQNDGLPVLTRRLGSGLFDDDRIIGPFVLIDEAS
ATAPCESGRANGRCFRMWYEGFRADNNFYIGHALSPDGINWTIVNGPDELGSVLSNSGGF
TAFDSNDVGLTAVIKDGAIYRMWYQAKDYNTPDTFRIGHVTSVNGVNWVRPDPNDPAFYG
GLDTINLPGTNDDVWVVRLLKEDLTYRMWYATAGTPNSTRFGLVEMTQGVPITPTVRRSG
DEFRIEFNTQRTIPVSGSVLITLPPGVSLDQFSVIELQGFEPGAVLARERGAITDAYSGF
SARDALLLRLPNGAVPGPKVIRFSLGAEAPNPAYLLLQTFDTHKVLERARVNLGDLRITQ
SVGTVVAGASVVYTVTVSNVGPNAVSNALLNSVFPTQLTGITWTCAPSGGASCAPGSGSG
NWSSKPLDLPSGSSVTFTVTGNLPPAETGNLTDTVSVSTPAVLNELTPGDNVSTLVTPIE
VRGDLSITRASNPVVPQAGQPITYTLTVANSGPSTVVGANVVNMFPISVTNVIWNCSATS
GSVCPAPGSGNMSAAVTLAPGGIATFTATGMVSPSAVVMPPHSAMVTVPGNVTDPNPDNN
VFTDGGGLGRSADLAISKAVAPATVVPGLPVTYTITVTNTGAADADGATVLDLFPPTITN
VTWTCSGAAGAGCAQASGSGDLMVTLSSFPVGGSATITMTGIVAAQATGNLINTAQVLPP
VGVEDPAFANNSASISSVLQPRTDLSIAQTTPSHAVVGQTITYTITVQNNGPSVAAGARV
STTTPAHVVVTGWVCAASAGSQCGAASGAAPVDDVVTLAPGGAITYTVTGTVFNRAVGQL
PFSGAVVAPASAEDPVLTNNQAQSSTQALYVVTLPVVVR
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgcaatattgctgttctctggcttcttggtttcctcggtggtcttttggtattc
gctcccccaacaggacgcacaccggtcgctcacgcgacagttccgaacgaacagaactgg
acggtgacgcctggcacatgcgatccgtcgtttcaaggcgccgtctttgctgcgtggaat
ccggcatcgggcaatcccaactgtggcgtcttcacctctggcgcgccctcgcttaatcag
ttcgataccggtcaagtttttcctccgaatgtgctccgggatgaagcgagtgtcactgca
ccatgtgaaaatggtcgcaccgccgggctgtgttaccgaatgtggtacgtcggcacgcgc
tccggcgagccgtatcgccggattggatacgctgtctcgccggatggcgtctcctggtat
cgcgtgcagggtccgcacaccggcggcagcgtcttcgaggggtcgggacagccgggcagt
ttcgatgagaatggcgcgaccacgtttcacgtgatcaaagatggcggggagtaccgtatg
tggtacaccggcgtcaacagcagtgggacctggagaggtttcggctatgcaacctcgaac
aatggcattacctggacgcgacaaaacgacgggctgccggtgttgactcggcgcctggga
tcgggtttgttcgacgatgaccgcattatcggaccgtttgtgttaattgatgaggcaagc
gccactgcgccgtgtgaaagcggtcgcgcgaacgggcgctgcttccgcatgtggtatgag
ggattccgggcggataataacttttacatcggacatgcattgtcgcctgatggcattaac
tggacgattgttaatggacctgacgaactcggctcggttctctccaattcgggcggattt
accgcctttgattctaatgatgtcggcttgactgcggtcatcaaagatggcgcgatctac
cgcatgtggtaccaggcaaaagattacaacacgccggacaccttcagaatcgggcatgtc
acttcggtgaatggggtcaactgggtgcgtcccgatccgaatgatcctgcgttctatggc
ggcttagacacgatcaatcttcccggaaccaacgatgatgtgtgggtcgtccgtcttttg
aaggaagacctgacctaccgtatgtggtacgccacggcgggcacgcctaacagcacccgt
tttggtctggtcgagatgacgcagggcgtgccgattacgccaacggtgcggcgcagcggt
gatgagttcaggattgagttcaacacacagcgaacgataccggttagtggcagtgtgttg
atcaccctgccgccgggcgtttcgctcgaccagttttcggtcatcgaattgcagggattt
gaacctggcgcggtccttgcgcgcgagcgcggcgcgattaccgatgcgtacagcggcttc
tcggcgcgcgatgcgctgctgctgcgcctgccaaatggcgcggttccaggaccaaaggtg
atccgctttagccttggcgcagaggcgcccaatcctgcctatcttctgctccagaccttc
gacacccacaaggtgctcgaacgggcgcgcgtcaatctgggagatctgcgaatcacacag
agtgtgggaacagtcgttgcgggcgcatcggtcgtttacaccgtcacggtcagtaatgtc
ggtccgaatgcggtctcgaacgccttgctgaacagcgtcttcccaacgcaactgacggga
atcacctggacctgcgctccatcgggaggcgcgtcgtgcgctccgggaagcggcagcggc
aactggagcagtaagccgctcgatctcccatcgggcagcagtgtcacgtttacggtgacc
ggcaatctgccgcctgcggaaaccggtaacctgacggatactgtcagcgtttccacaccg
gctgtgctcaatgaactgacgcctggcgataatgtctcgactctggtgacgccgattgag
gtgcgcggcgatctgtcgatcacacgtgccagcaatccggtggttccgcaggcgggtcaa
ccgatcacctatacgctgaccgtggcgaacagcggaccgagcaccgtcgtcggcgcgaat
gtggtcaatatgttcccgatcagtgtgacgaacgtcatctggaattgcagcgccacatcc
ggttctgtctgcccggcgccgggcagcggaaacatgagtgcagcggtcaccctggcacct
ggcggcattgccacgttcactgcaaccggtatggtgtcgccatctgccgttgtgatgccg
ccgcactcggcgatggtgaccgtgccggggaatgtgacagatcccaacccggacaataat
gtgttcaccgatggcggcggattggggcggtccgccgatctggcgatcagcaaggcggtt
gcgcccgcaacggttgttcccggtcttccggtcacctacacgatcaccgtgaccaacacc
ggtgctgccgacgcagatggcgcaacggtgctcgacctgttcccgccgacgatcacgaat
gtgacgtggacgtgcagcggcgcggccggcgcaggttgtgcgcaggcaagcggcagcggc
gatctgatggtgaccctgtcatcattccccgtgggcggatcggcaacgatcacgatgacc
ggcatcgtagcggcgcaggcgaccgggaacctgatcaacacagcgcaggtgctgccgccg
gttggggttgaagacccggcgtttgccaataacagcgcgtcgatttcgagtgtgctccaa
ccgcgcaccgacctgtccattgcgcagacgacgccatcccacgcagttgtggggcagacc
atcacctataccatcacggtgcagaacaacggtccaagtgttgctgccggcgcgcgcgtc
agcacgacgaccccggcgcatgttgtggtgacgggatgggtgtgcgcggcgtcggcgggg
tcgcagtgtggcgcagcgagcggcgccgcgccggtagacgacgtcgtaacgctggcgccc
ggcggcgcgatcacctacacggtcaccggcacggttttcaatcgggctgtgggacaactt
cccttctccggcgccgtcgttgcgccggcaagcgccgaagacccggtgctgacgaacaac
caggcgcagagttcaacccaggcgctgtatgtggtgacgctgccggtagttgtgcggtga
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