Roseiflexus castenholzii: Rcas_0855
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Entry
Rcas_0855 CDS
T00585
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
rca
Roseiflexus castenholzii
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rca03036
]
Rcas_0855
Chromosome and associated proteins [BR:
rca03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
Rcas_0855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_15
Nuf2_DHR10-like
Fez1
ABC_tran
BTG
Motif
Other DBs
NCBI-ProteinID:
ABU56971
UniProt:
A7NHM4
LinkDB
All DBs
Position
complement(1118031..1121633)
Genome browser
AA seq
1200 aa
AA seq
DB search
MYLRRLEIQGFKTFAGHTLFEFQPGVTAVVGPNGSGKSNLVDAIRWALGEQHPGTLRCKR
TEDLIFSGGGRRAPAGFAEVSLTIDNRDRLLPAPYSEVTITRRATRSGENEYFINRQRVR
LRDVQEVAAPISGAYAIINQGLVDAALNLHPLERRRLFEDAAAISVYEQRRTDAERRLRE
TGANVARCADILTELEPRLRSLKRQAALARSHRDLTAELHTLLEQYYAHLWNIARTDCAA
AERSVQALESTLAARQAEIAAASATLRHTRDHIHALRHRIGALHAESSALHTDAETVQRT
LAVGQERLTALTRQIEDQEHALRDLDHQRTAQQADQEAAAAHLAGAEQRLAQIQQEYSAH
ESRRAERLANRALLRQTLDEAHHTLMEIRAALGVVQRQMVQIADQYEHLIRERAVAEESL
AAAQETLAARRHESAQAEAQVAALERELADAALRAEQARGDVEHRRRQRAAAAETLEAAR
RRQMDLEARLETLRRLHHSYAGTFAGVRAAMQWAEAQRRTGFALVATLLRVPAELETAIE
VALGSRLQNIVVDHWEDAEAAIEALKRSGEGRATFLPLDTIRARGSNGGRAYGTVDPDDG
VLGVAANLIDVDERYRPIADMLLGRTLVVRSLAVARRELSRIGGGWTMVTLAGEQVSAAG
AVTGGAAVKESGTLRRERELRELPERLEAATRAVEQAHAHYVVASEAYAAAEQMAREAER
QQRQVQRNLDQERAAAAQAQRAVDRADAERLIRQRRIEQIDAEMTALLDRRRSVIAEHED
LTQREAAARAQVDQLQAQEAAQRAEDAADDEALAVLRARRADAEGEVRALRAVLHTGAQA
LARSNDQRRALEERIERLYHERETLTHELTHSAARHQALLEQIDALRARIDPAEAELTVL
EQQREEHETRTQNLTGALIDAESAYNRATIDAQRARDRLETLRERAAGDGIDIEAAARSH
PEPLPDGNPDTLHQRIIELKQRIARLGVINPLALEEYDEAAARYEFLSSQMHDLRAASAT
LNELIAELDTAIRTRFETTFRIVAAEFERSFTRLFGGGEARLVLINDNGGDDDDQNDARP
PGIASLGVDIIARPPGKRQQHLALLSGGERALTAAALLFAILRANPTPFCVLDEVDAALD
EANIGRFRDALTELSEKTQFIVVTHNRGTIEAADTIYGITMGDDGASRVLSLRLEEIDRP
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgcgtcgtctcgaaatccaggggttcaaaacattcgccgggcatacgctgttc
gagtttcagcccggtgtgacggcggtggttggtcccaacggcagcgggaaatcgaacctc
gtcgatgccatccgctgggcgctcggcgagcagcaccccggcacactccgctgcaaacgc
accgaagacctgatcttcagcggcggcggacggcgcgcgcccgctggcttcgctgaagtc
tcgctgaccatcgataatcgtgatcgcctgttgcccgcgccgtacagcgaagtgaccatt
acccgccgcgcgacgcgctctggcgagaacgagtatttcatcaatcgccaacgtgtccgg
ctgcgcgatgtacaggaagtcgcagcgccgatcagcggcgcgtatgcgatcattaatcag
ggactcgtcgatgcggcgctcaatctgcaccccctggagcgccgtcgtctcttcgaggac
gcagcggcgatcagcgtctatgagcaacgccgcaccgatgcggaacggcgcctgcgcgag
acgggcgccaatgtcgcgcgctgcgccgatattctgaccgaactcgaacctcgcctccgt
tcgctgaagcgccaggcggcgcttgcccgctcccaccgcgacctgaccgccgaattgcat
acgttgctcgagcaatattatgctcatttgtggaatattgcacggacggattgcgctgcc
gccgaacggtcggttcaggcgctggagtccacgcttgcagcacgccaggcggagatcgcc
gctgcctccgctacgctccggcacacccgcgatcatattcatgctcttcgccaccgcatc
ggcgcgctgcacgccgaaagcagcgccctccacactgatgctgagacagtgcaacggacg
ctggcggtcggtcaggagcgtctcaccgcgctgacacgccagatcgaggatcaggaacac
gcattgcgcgacctcgaccatcagcgcactgcacaacaggcggatcaggaagccgctgcc
gcacaccttgccggcgccgaacaacgtctggcacagatccagcaggagtacagcgcccat
gagtcgcgtcgcgccgaacggctcgccaatcgcgctctgttgcgccagacgctcgatgaa
gcgcaccacacgctgatggagatccgcgcagcgcttggagtggtgcaacgtcagatggtg
cagattgccgatcaatacgaacacctgatccgtgaacgcgccgtcgccgaagagtccctg
gctgccgctcaggagacgctggccgctcgccgccacgaaagcgcgcaggctgaggcgcag
gtcgcggcgctggagcgcgagctggctgatgccgctctccgcgccgaacaggcacgcggt
gatgtcgaacaccgtcgccgccagcgcgccgccgccgccgagacgctcgaagcagcgcgg
cggcggcagatggacctggaagcgcgtctggaaacgctgcgacggctccatcacagttac
gccggaacgttcgccggcgtgcgtgcagcgatgcagtgggcggaagcgcagcggcgcact
ggctttgcgctcgtcgcaaccctgctgcgcgttccggcggaacttgagaccgcaatcgaa
gtggcgcttggttcgcgccttcagaacatcgtcgtcgatcattgggaagatgccgaggca
gccatcgaagccctcaaacggagcggcgaagggcgcgcaacattcctcccgctcgatacc
atccgtgcgcgtggcagcaatggcggacgggcatatgggacggtagacccggacgacggc
gtgctcggcgtcgccgccaacctgatcgacgtggatgagcgttaccgtccgatcgccgat
atgctcctcggtcgtaccctggtggttcgctcgctggcggttgcccggcgtgaactctcg
cgtatcggcggcgggtggacgatggtcaccctggcaggagagcaggtcagcgccgctggc
gccgtcaccggcggcgcagcggtgaaggagagcggaacactgcggcgcgaacgcgaactc
cgcgaacttcccgaacgcctggaagcggcgacgcgcgccgtcgaacaggcgcacgcgcac
tacgtggtcgccagcgaagcatatgccgccgctgaacagatggcgcgcgaggcggaacgt
cagcagcgccaggtgcagcgcaacctcgaccaggaacgcgccgctgctgcacaggcgcag
cgcgctgttgaccgtgccgatgcggaacgcctcatccggcaacggcgcattgagcagatc
gacgcagaaatgaccgcactgctcgatcgccgcagatcggttatcgccgaacatgaagac
ttaacgcagcgtgaagccgcggcgcgcgcgcaggtcgatcagttgcaggcgcaggaagca
gcacaacgcgccgaagacgccgccgacgacgaggcgctggcagtcctgcgcgcgcgccgc
gccgatgccgagggcgaggtgcgcgccctgcgcgccgttttgcacaccggcgcacaggcg
ctggcgcgcagcaacgatcagcgtcgggcgctggaagaacgtatcgagcgcctgtatcat
gaacgtgaaacactgacgcatgaactgactcacagcgctgcccgccatcaggcgcttctg
gaacagatcgacgcgctccgcgcccgcatcgatcccgccgaagcggagttgaccgttctg
gaacagcagcgtgaggagcacgagacgcgcacccagaacctgaccggcgccctgatcgac
gcagagtcggcatataaccgggcgaccatcgacgcgcagcgcgcgcgggatcgcctggaa
accctgcgggagcgcgccgccggcgacggcatcgacattgaagccgctgcgcgctcccat
cccgaaccgctgccggacggcaacccggacacgctgcatcagcgcatcatcgaactgaaa
cagcgcattgcacggctgggagtcatcaacccgctggcgctcgaagagtacgacgaagcc
gctgcgcgctacgagttcctgagcagtcagatgcacgacctgcgcgctgcttcggcaacg
ctcaacgagttgattgccgaactggacaccgccatccgcactcgcttcgaaacgacgttc
cgcattgtcgctgccgagttcgagcgcagtttcacccgactattcggcggtggcgaggcg
cgcctggtgttgatcaacgacaatggcggcgacgacgatgatcagaatgacgccagaccg
ccaggcatcgcatcgcttggcgttgatatcatcgctcgcccaccggggaaacggcaacaa
cacctggcgctgctgtcgggcggagaacgggcattgaccgctgccgcgctgctcttcgcc
attctcagggcgaacccaacgccgttctgcgtcctcgatgaggtcgatgccgcgctcgat
gaggcaaatatcgggcgcttccgcgatgcgctcaccgaactgagtgaaaagacgcagttc
atcgtcgtcacgcacaatcgcggcaccattgaggcggctgacacgatctacggcattact
atgggcgacgatggcgcatcccgcgtgctctcgctccggctcgaggagatcgaccgtccg
tag
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