Rickettsia canadensis CA410: RCA_02325
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Entry
RCA_02325 CDS
T01736
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rcc
Rickettsia canadensis CA410
Brite
KEGG Orthology (KO) [BR:
rcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcc03016
]
RCA_02325
Enzymes [BR:
rcc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RCA_02325
Transfer RNA biogenesis [BR:
rcc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RCA_02325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DUF5638
Motif
Other DBs
NCBI-ProteinID:
AFB21038
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All DBs
Position
537225..538079
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AA seq
284 aa
AA seq
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MQMIDNQKTLEEVCKQLASKTCLSIDTEFERRYTYYAQLSIIQVKAENYCGIIDALSNVD
LNIFNKLLADNNITKIFHAPREDLEIFYNLFKTLPSNVFDIQIAANICGFGKQLSYDDLC
YKLFGIAIDKTHQKSNWLKRPITSDMLNYAMLDVEYLYKIYKELNNIIIRSNLVNKYQTT
LGSLLDVRNYKVEPKDAWKKIKYRSDDKSFNRRIQILAAYREKNAQTIDIPRKHFILDED
LIKLCKYLPVTNKDFKNLNLKSKYLYKQKYKDEIISLCNNFFML
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgatcgataatcaaaaaacattagaagaagtttgtaaacagttagcaagtaag
acatgcttaagcatagatacagaatttgagcgtcgctatacttattatgctcagcttagt
ataattcaagtgaaagcagaaaattattgcggaataattgatgcattaagcaatgtggat
ctaaatatttttaataagctgcttgcagacaataatattactaaaatatttcatgctcct
cgtgaagatttagagattttctataacttgtttaaaacactaccttctaatgtttttgat
atacaaattgcagcaaatatttgtggattcggtaaacaactaagctatgatgatctttgt
tataaactattcggtattgctattgataaaactcatcaaaaatctaactggttaaaacgt
cctattactagtgatatgttaaattatgctatgttagatgttgagtatttatataagata
tataaagagttaaataatataattattagaagtaatttagttaataaatatcaaactact
cttggttctttattagatgttagaaattataaggttgagccaaaagatgcttggaaaaaa
ataaaatatagaagtgatgataagagctttaaccgtagaattcaaatacttgcagcttat
cgtgaaaagaatgcacaaactatagatattcctcgtaagcattttattttagatgaagat
ttaataaagctgtgtaaatacttgccggtaacaaataaagattttaaaaatctaaattta
aaaagcaaatatttgtataaacaaaaatataaagatgaaataataagtttgtgtaataac
ttttttatgttataa
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