Rickettsia canadensis CA410: RCA_03135
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Entry
RCA_03135 CDS
T01736
Name
(GenBank) multidrug resistance protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
rcc
Rickettsia canadensis CA410
Pathway
rcc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RCA_03135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcc02000
]
RCA_03135
Enzymes [BR:
rcc01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
RCA_03135
Transporters [BR:
rcc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RCA_03135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
nSTAND3
RsgA_GTPase
AAA_21
AAA_22
ABC_ATPase
AAA_16
AAA_15
DEAD
MMR_HSR1
MobB
T2SSE
TrkA_N
Zeta_toxin
SbcC_Walker_B
Treslin_N
Motif
Other DBs
NCBI-ProteinID:
AFB21194
LinkDB
All DBs
Position
complement(706861..708624)
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AA seq
587 aa
AA seq
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MSNNNLNDSYTAVYIITRLIKEHVKPYASKIYFAIFCMSIAAICTAVIVHAVQPIIDKIF
LTHDRKMLVIMPIVLTITFFIKGISEYYQNYLIKFVGQRVLNDLQMKMYEHLLFADIAFI
QNQSSGRLISRVTNDISLMRGAVSNLLVGCAKHFLTVVFLIGMMFQLEPILSYVVFFVFP
LAVYPVQKMGRIIRKISSQSQEELGHYTSRLDETFQSIKIIKSFVGEKIESNRASLIVNN
ILEFYKKASQLDAMVSPIMEGLSGLAVGGMVWYGGNLVLNGKSTPGALFAFLASFAAAYR
PFKSLVSLNVNLQEGIAAAKRVFNILDSKPLIKDREDAKEVDLYNPQITFEKLALSFESK
IAIKYIDLKLEPHKMIAFVGRSGSGKTSLSNLLVRFYDPNDGRVLINNHDIKDIKLTSLR
GQISLVTQDTHLFDTTVAENIAYAQADTTREKIIRAAKYADAHEFIMHLPNGYDTMIGVQ
GMTLSGGERQRLSLARAFLKDAPILILDEATSSLDQASEKKILESLKKLRQGKTTLIITH
RLSSITDLDNIIVMKNGEICEQGTHTQLLKNKEEYYRLYNKELRENS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataataatttaaatgatagttacacagccgtttacattataacaaggctgata
aaagagcatgttaaaccttatgcaagtaaaatatattttgcgatattttgtatgtctatt
gcagcaatttgtactgctgttatagttcatgcagtccaacctattattgataagattttt
ttaacgcatgataggaaaatgcttgtaataatgccgatagtgctgactattacttttttt
ataaaagggatttcggaatattatcagaattatctaataaaatttgtagggcagagggta
ttaaacgatttgcagatgaaaatgtatgagcatttattatttgctgatattgcttttatt
caaaaccaatcttcagggcgtcttatatctcgtgttactaatgatatttctttgatgcgt
ggggctgtttctaatttgcttgtcgggtgtgctaaacatttcctaacggtagtatttttg
atagggatgatgtttcagttagaaccaatattatcttacgtagttttttttgtttttccg
cttgctgtttatcctgtacaaaaaatgggaagaataatacgtaaaatatcatcacaatcc
caagaggagctaggacattatacttctaggcttgatgaaacatttcagtcaattaagatt
ataaaatcttttgttggtgaaaaaatagaaagtaatagagcgtcattaattgttaataat
attttagagttttataagaaagcttctcagttagatgcgatggtttcgccgattatggag
gggttaagcggtcttgcagtcggggggatggtatggtatggaggtaatttagtccttaat
ggaaaaagtacacccggtgctctttttgcttttttggcttcttttgcagcggcttataga
ccgtttaaaagcttagtatcgttaaacgtcaatttgcaagaaggaattgcagctgctaaa
agagtatttaatattttagatagcaagcctcttattaaagatcgtgaagatgctaaagaa
gtagatttatataatccacagattacttttgaaaaattagctttaagttttgagagtaaa
atagctataaaatatatagatttaaagctagaacctcataaaatgattgcgtttgttggg
cgttcaggtagcggtaaaacttcgcttagtaatttattagtgcgtttctatgatccaaat
gatggaagagttttaattaataatcatgatattaaagatattaagcttacttcgcttaga
ggtcagatttccttagttactcaagatactcatttatttgatacaacagttgccgaaaat
atagcatatgctcaagctgatactacaagagaaaaaataattagagcagcaaaatatgcc
gatgctcatgagtttattatgcatctgccgaacggttacgatactatgataggagtgcag
gggatgactctttcaggcggtgagcgtcagcgtttatcgcttgctagagctttcctaaaa
gatgcacctattttaattttggatgaagcaacgagtagcttagatcaagcttccgaaaag
aaaattctagaatctttaaagaaattacgccaaggaaaaaccactttaattattacacat
cgtttaagcagtattactgatcttgataatattattgtcatgaaaaacggtgagatttgt
gagcagggtactcacacacaattacttaagaataaggaagagtattataggttatataat
aaagaattaagagaaaatagttga
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