Ruminococcus champanellensis: RUM_03280
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Entry
RUM_03280 CDS
T02600
Name
(GenBank) cysteine desulfurase NifS
KO
K04487
cysteine desulfurase [EC:
2.8.1.7
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00730
Thiamine metabolism
rch01100
Metabolic pathways
rch01240
Biosynthesis of cofactors
rch04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RUM_03280
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
RUM_03280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rch03016
]
RUM_03280
03029 Mitochondrial biogenesis [BR:
rch03029
]
RUM_03280
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rch02048
]
RUM_03280
Enzymes [BR:
rch01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
RUM_03280
Transfer RNA biogenesis [BR:
rch03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
RUM_03280
Prokaryotic type
RUM_03280
Mitochondrial biogenesis [BR:
rch03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
RUM_03280
Prokaryotic defense system [BR:
rch02048
]
DNA phosphothiolation system
Sulfur modification proteins
RUM_03280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
Pyridoxal_deC
DUF3843
Motif
Other DBs
NCBI-ProteinID:
CBL16567
UniProt:
D4LAC2
LinkDB
All DBs
Position
358247..359446
Genome browser
AA seq
399 aa
AA seq
DB search
MEKRIIYADNAATTQVSKPVLEAMLPYLTGQYGNPSSIYALGRHAQRDIELARQQVAEAL
GCEPGEIFFTGCGTESDNWAIRSTAARLGAKGKRHIVTSVFEHHAVLHTCAALEKEGFEV
TYLPVSREGLLTAQQVADAIRPDTALVSIMYANNEIGTIQPISEIAAVCREKDVLFHTDA
VQAVGHVPINVREQGIDMLSLSGHKLHAQKGIGALYVRKGVPLPNLLYGGAQERSRRPGT
ENVPAIVGLGTAITLAVENLEEKMERVTALRNRLIDGILDIPRTRLNGDRVHRVPGNCNI
SILGIEGEFLLLALDQLGVMASSGSACTSGSLDPSHVLLSLGLCHEVAHGSLRLSISDET
SREDVEYIIWAVHQAAERGRAMSPLWEAIQAGKVDYPDI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcgaatcatctatgcggacaatgccgccaccacccaggtgtccaagcctgtg
ctggaggcaatgctgccctacctgaccgggcagtacggcaacccctccagcatttacgcc
ctgggacgccatgcccagcgggatatagagcttgcccggcagcaggttgcggaggctttg
ggctgtgaaccgggggagatcttctttaccggctgcggcaccgagtccgacaactgggca
atccgttccaccgccgcccggctgggggcaaagggcaagcgccacattgtcaccagcgtg
tttgagcatcacgccgtgctgcacacctgtgccgccctggagaaggagggctttgaggtc
acttacctgccggtcagccgggaggggctgctgaccgctcagcaggtggcggatgccatc
cggccggataccgccctggtgtccatcatgtacgccaacaacgagatcggcaccatccag
cccatctctgaaattgcggcagtatgtcgggaaaaggacgtgctgttccatacggatgcg
gtacaggcagtgggacatgtgcccatcaacgtccgggaacagggcatcgacatgctgtcc
ctgtccggtcataagctccacgcccagaagggcatcggcgcactgtatgtgcgcaagggc
gtgcccctgcccaatctgctgtacggcggcgcccaggagcggagtcgccgacccggtacg
gagaatgtgcctgccatcgtgggactgggtaccgccatcaccctggcagtggagaacctg
gaggagaagatggaacgggtcactgccctgcggaaccggctcattgacggcattctggac
attccccgcacccggctgaatggtgaccgggtgcatcgtgtgcccggcaactgcaatatt
tccattctgggcatcgaaggggagttcctgctgctggcgctggatcaactgggcgtcatg
gcgtccagcggttccgcatgcaccagcggttctttggatccctcccacgttctgctttcc
ctggggctgtgccacgaggttgcccacggctctctgcggctgtccatctccgacgaaacc
agccgggaggacgtggagtatatcatctgggcggtgcaccaggcagcggagcggggcaga
gccatgtcccctttgtgggaagccatccaggcaggcaaagtggattatccggatatctga
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