Ruminococcus champanellensis: RUM_09080
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Entry
RUM_09080 CDS
T02600
Name
(GenBank) tryptophan synthase, beta subunit
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00260
Glycine, serine and threonine metabolism
rch00400
Phenylalanine, tyrosine and tryptophan biosynthesis
rch01100
Metabolic pathways
rch01110
Biosynthesis of secondary metabolites
rch01230
Biosynthesis of amino acids
Module
rch_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RUM_09080
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
RUM_09080
Enzymes [BR:
rch01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
RUM_09080
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
CBL17083
UniProt:
D4LBT8
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All DBs
Position
993040..994224
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AA seq
394 aa
AA seq
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MKKGRFGVHGGQYIPETLMNAAIELEQAYLHYKDDPAFNRELTELMNEYANRPSRLYYAG
QLTNALGGAKIYLKREDLNHTGSHKINNVLGQALLAKKMGKTRLIAETGAGQHGVATATA
AALMNMECVVFMGEEDTRRQALNVYRMKLLGAQVVPVTSGTATLKDAVSEAMREWTSRID
DTHYCLGSVMGPHPFPTIVRDFQAVISRETKAQLLEKEGRLPDAVIACVGGGSNAMGSFY
HFIDDPTVRLIGCEAAGRGIDTFETAATINTGKLGIFHGMKSYFCQDQYGQIAPVYSISA
GLDYPGVGPEHAYLHDIGRAEYVPVTDEEAVEAFEYLSRTEGIIPAIESAHAVAYAMKLA
PTMRRDQIIVITVSGRGDKDCAAIARYRGEDLYD
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagggaagattcggcgttcacggcggacagtacattccggagaccctgatgaac
gctgccatagaactggagcaggcatatctgcattacaaggatgaccccgcattcaaccgg
gaactgacggagctgatgaatgagtatgcaaaccgtccctcccggctgtactatgcaggg
caactgaccaatgccctgggtggcgcaaagatctatttgaagcgggaggatctgaaccat
accggctcccacaagatcaacaatgtgctggggcaggctctgctggcaaagaagatggga
aagacccggctcatcgccgagaccggtgccggacagcatggtgtggcaactgctacagct
gctgccctgatgaacatggagtgcgtggtattcatgggggaggaggatacccggcggcag
gcgctgaatgtgtacagaatgaagctgctgggtgcacaggtggtgccggtgaccagcggc
acggcgacgctgaaggatgcggtctccgaggccatgcgggaatggacatcccggatcgat
gacacccattactgtctgggttccgttatggggcctcatccctttcctaccattgtccgg
gatttccaggcggtgatctcccgggagaccaaagcgcagctcctggagaaggagggcagg
ctgccggatgcagtgattgcctgtgtaggcggcggttccaatgccatgggcagcttttat
catttcattgacgatcccaccgtgcggctcattggctgtgaagcggcaggcaggggcatc
gatacctttgaaaccgctgcaacgatcaacaccggcaagcttggcattttccacgggatg
aaatcctacttctgtcaggatcagtacggtcagattgccccggtgtattccatttccgcc
gggctggattacccgggcgtcggaccggagcatgcgtacctgcatgacattggcagagcg
gaatatgtgccggtgacggatgaagaagcggtagaagcctttgagtatttatccaggacg
gagggtatcattcctgccattgaatccgcccatgcggttgcctatgccatgaagctggct
cccaccatgcgccgggatcagatcattgtaattactgtttccggtcgtggggacaaggat
tgtgcagccattgccagatacagaggggaggatctgtatgactaa
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