Rosa chinensis (China rose): 112167550
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Entry
112167550 CDS
T06020
Name
(RefSeq) oligoribonuclease isoform X1
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112167550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcn03019
]
112167550
03009 Ribosome biogenesis [BR:
rcn03009
]
112167550
Messenger RNA biogenesis [BR:
rcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
112167550
Ribosome biogenesis [BR:
rcn03009
]
Eukaryotic type
Pre-60S particles
RNases
112167550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF6604
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
112167550
NCBI-ProteinID:
XP_024160344
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Position
5:complement(48557466..48566338)
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AA seq
235 aa
AA seq
DB search
MEHLANAFSALNVDVEDDDEIRGAPSTSKATEDTSGKRDKANNSDNVEMADHEYKMPLVW
IDLEMTGLNVEVDRILEIACIVTDGRLTKSIEGPDLVIHQSKECLDRMGEWCQTHHKDSG
LTTKVLQSTISEGEAEKQIIEFVKRNIGTYTPLLAGNSVYVDFAFLKKYMPDLASLFSHV
VVDVSSVTALCVRWYPRDKKKAPSKENKHRALDDIRESIKELKYYKQNIFKAIRN
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggagcatctcgcaaatgcgttctctgcgctcaacgtcgacgttgaagacgacgatgaa
atacgaggggcgccttccacttccaaggccacagaggacacttcaggcaagagggacaaa
gccaacaactctgataacgtcgaaatggcagatcatgagtacaagatgccccttgtatgg
attgacttggaaatgactggtttgaatgttgaagttgatcggatactggagattgcttgc
atagttaccgatggccgactaaccaaatccatagagggccctgatctggttattcatcaa
agtaaggagtgtttggataggatgggagaatggtgtcaaactcatcataaagatagtggg
ttgacgactaaagtgcttcaaagtacaattagtgaaggagaagctgaaaagcagatcata
gaatttgtaaagagaaacattggaacatatacacctcttttagcaggaaactcagtttat
gtggactttgcatttttaaagaaatacatgccagatttggccagcctgttctcccatgta
gtagttgatgttagcagtgttacagctctatgcgttcgctggtatcctagggataaaaag
aaagcgccttctaaagaaaataaacacagagccctggatgacatcagggaaagcatcaag
gaactgaaatactacaaacagaatatattcaaagcaattagaaactga
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