KEGG   Rosa chinensis (China rose): 112167550
Entry
112167550         CDS       T06020                                 
Name
(RefSeq) oligoribonuclease isoform X1
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    112167550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcn03019]
    112167550
   03009 Ribosome biogenesis [BR:rcn03009]
    112167550
Messenger RNA biogenesis [BR:rcn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     112167550
Ribosome biogenesis [BR:rcn03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    112167550
SSDB
Motif
Pfam: RNase_T Rv2179c-like DUF6604 XPG_I_2
Other DBs
NCBI-GeneID: 112167550
NCBI-ProteinID: XP_024160344
LinkDB
Position
5:complement(48557466..48566338)
AA seq 235 aa
MEHLANAFSALNVDVEDDDEIRGAPSTSKATEDTSGKRDKANNSDNVEMADHEYKMPLVW
IDLEMTGLNVEVDRILEIACIVTDGRLTKSIEGPDLVIHQSKECLDRMGEWCQTHHKDSG
LTTKVLQSTISEGEAEKQIIEFVKRNIGTYTPLLAGNSVYVDFAFLKKYMPDLASLFSHV
VVDVSSVTALCVRWYPRDKKKAPSKENKHRALDDIRESIKELKYYKQNIFKAIRN
NT seq 708 nt   +upstreamnt  +downstreamnt
atggagcatctcgcaaatgcgttctctgcgctcaacgtcgacgttgaagacgacgatgaa
atacgaggggcgccttccacttccaaggccacagaggacacttcaggcaagagggacaaa
gccaacaactctgataacgtcgaaatggcagatcatgagtacaagatgccccttgtatgg
attgacttggaaatgactggtttgaatgttgaagttgatcggatactggagattgcttgc
atagttaccgatggccgactaaccaaatccatagagggccctgatctggttattcatcaa
agtaaggagtgtttggataggatgggagaatggtgtcaaactcatcataaagatagtggg
ttgacgactaaagtgcttcaaagtacaattagtgaaggagaagctgaaaagcagatcata
gaatttgtaaagagaaacattggaacatatacacctcttttagcaggaaactcagtttat
gtggactttgcatttttaaagaaatacatgccagatttggccagcctgttctcccatgta
gtagttgatgttagcagtgttacagctctatgcgttcgctggtatcctagggataaaaag
aaagcgccttctaaagaaaataaacacagagccctggatgacatcagggaaagcatcaag
gaactgaaatactacaaacagaatatattcaaagcaattagaaactga

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