Rosa chinensis (China rose): 112175582
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Entry
112175582 CDS
T06020
Name
(RefSeq) serine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112175582
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rcn01007
]
112175582
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcn03016
]
112175582
Enzymes [BR:
rcn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
112175582
Amino acid related enzymes [BR:
rcn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
112175582
Transfer RNA biogenesis [BR:
rcn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112175582
Prokaryotic type
112175582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF724
CLZ
Motif
Other DBs
NCBI-GeneID:
112175582
NCBI-ProteinID:
XP_024169037
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Position
7:complement(68775107..68780238)
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AA seq
524 aa
AA seq
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MGLGGTTLQTLKLAAIPSPSSSYSSSFRSVFNPLSKTFLYRRSHTPRPQDPLFFVKGFSA
SAVQATVATAPKATNPGEKGVKPQWKAAIDFKWIRENKDAVAANIKKRNSNANLELVLQL
YNQMLNLQKEVERLRAERNAVANKMKGKLESFERQKLIEEGKNLKEGILKLEEDLLKLTD
ELQQEAQCIPNMTHPDVPIGGEDSSTIRKMVGIPREFNFPAKDHLQLGKDLDLFDFDAAS
EVSGSKFYYLKNEAVMLEMGLINWTLLEVMKRGFTPLTTPEIVRSSVVEKCGFQPRGTNT
QVYSIEGSDQCLIGTAEIPVGGIHMDSILSASVLPLKYVAVSHCFRTEAGAAGTATRGLY
RVHQFSKLEMFILCQPEESDFYHEELIKIEEDLFSSLGLHYKTLDMASGDLGAPAYRKFD
IEAWMPGLARFGEISSASNCTDYQSRRLGIRYRSSEPASTNPKKGKGNLSPPQFVHTLNA
TACAVPRMIVCLLENNQQEDGSVVIPEQLRPFVGGLELIQPKSR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgggtcttggcgggactaccttacaaaccctcaagctcgctgcaattccttcaccctct
tcttcttactcttcttctttccgctccgttttcaatccattgtccaaaaccttcctctac
cgccgtagccacacaccaagacctcaagatcctctcttcttcgtcaagggcttctcagcc
tcggccgtacaagccactgtcgccacagcaccaaaagcaacaaacccaggtgagaaaggt
gtgaaaccgcagtggaaagcagcgatagatttcaagtggataagggagaacaaggatgct
gttgctgccaatataaagaagaggaactccaatgccaatttggaacttgtgcttcagctc
tacaatcaaatgttgaatcttcaaaaggaagttgagcgacttcgtgcagaaaggaatgcg
gtggcaaacaagatgaaagggaagttggagtccttcgagcgtcaaaaactcatagaggaa
ggaaagaatctgaaggaagggattcttaaattggaagaagacctgcttaagcttactgat
gagctccaacaggaagcacaatgtatacctaatatgactcatccagatgtcccaataggc
ggggaggacagttcaaccattagaaagatggtaggcatccctcgcgagtttaactttcct
gccaaggatcaccttcaacttggaaaggacctagatctctttgattttgatgctgcttca
gaggtcagcggctcaaagttctactatctcaagaatgaagcagtgatgctagagatgggt
cttatcaactggacgcttttggaagtcatgaaacggggcttcacacctttaacaactcca
gagattgtaaggtcctctgttgttgaaaaatgtggtttccaaccccgtggaacaaatact
caggtttattctattgagggcagtgatcaatgcctcatcggcactgcagagattcctgtt
ggaggaattcatatggattctattctttctgcatcagtgttacctttgaaatatgtggca
gtctcccattgcttccgtactgaggcaggtgctgcaggtacagcaacaaggggtctgtat
cgtgtccatcaattcagcaagttggagatgtttatattatgccaaccagaggagagtgac
ttttaccatgaagagctcataaaaattgaagaagatctattctcatcactaggattacat
tataaaactctggacatggcatctggggatttaggtgcacccgcttatcgtaaatttgat
attgaggcatggatgcctggattagctcggtttggtgagatatcaagcgcatcaaactgt
acagactaccaaagtcgccgtcttgggatacggtatcgttcttcagaaccagcatctaca
aatcctaaaaagggtaagggcaacctctctccaccacaatttgttcatacattaaatgca
acagcatgtgcagtaccacgaatgatcgtctgcctactggaaaataaccagcaagaagac
ggctctgtagttattcctgagcaattgaggccatttgtgggtggcctagagcttatacaa
cctaaatctagatag
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