KEGG   Rosa chinensis (China rose): 112176520
Entry
112176520         CDS       T06020                                 
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 5-like
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rcn03041]
    112176520
Spliceosome [BR:rcn03041]
 Complex A
  U2 snRNP components
   U2 related factors
    112176520
 Complex B
    112176520
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 zf-CCCH_4
Other DBs
NCBI-GeneID: 112176520
NCBI-ProteinID: XP_040366521
LinkDB
Position
7:complement(42423820..42435190)
AA seq 500 aa
MGDLETPAEKEGDGGVQPKMEARMSRKEKRKTMKKMKRKQTRKEIALKQQEEEEARLQDP
QELINMEQEEAKRSESVRIIFEERERAWIEAMEIRKKKRIEEEERRISALEYEELSRKQQ
IKNANDDGDDDWEYVEEGPAEIIWQENEITVKKKRVKVPKRNKDQRSIKEDSDRPTSNPL
PPQSEAFDDYKXASLSAQQLLETVAEQVPHFGTEQDKDHCPFHLKTGACRFGQHCSRVHF
YPDKSSTLLIKNMYNGPGLTWEQDEGLEYIDEEIERCYEDFYEDVHTEFLKFGEIINFKV
CINGAPHLRGNVYVQYSALESALVAHQSVNGRYFAGKQISCDFINVTRWKVAICGEYVKS
RYKTCSRGRTCNFIHCFRNPGGEYEWADSDRPPPKYWVEKMVALFGYSDAYKKHMMEDNS
GQLRNSSKKSMTDSQRYVVQRSSSRDGSYSSFAGSSRRYDNENYAPKGTGHRRPSGEENA
YLKDFNHRKNRKYYIERVSR
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgggagatttagaaaccccagcagaaaaagaaggagatggaggtgttcagcctaaaatg
gaggctaggatgagccggaaggagaaaaggaaaaccatgaagaagatgaagcggaagcag
acgaggaaggaaatcgctctcaaacagcaagaagaagaagaggcgaggctccaagatcct
caagagcttatcaacatggagcaagaggaggccaagaggtccgagagtgtgaggatcata
ttcgaggagcgagagagagcttggattgaagccatggagattcgaaagaagaaacgaatc
gaagaagaggaacgtagaattagcgctctggaatacgaggaactatcccgcaagcaacag
atcaaaaatgcaaatgatgatggtgatgatgactgggagtatgtagaagagggacctgct
gaaatcatctggcaggaaaatgaaataactgtcaagaagaaaagagtcaaggttccaaag
aggaataaagaccagcgaagtataaaggaggattctgatcgacctacatcaaatcctctc
cctccacaatccgaagcttttgatgattacaaanatgcttctttatcagcgcagcagctg
ttagagactgtggctgaacaagtaccgcattttggaactgaacaggataaagatcattgt
cctttccatttgaaaactggagcttgtcggtttggtcagcattgcagccgggtgcatttc
tacccggataaatcatccacgctgcttatcaagaacatgtacaatggtcctggccttact
tgggagcaggatgaggggctcgagtacattgacgaagaaattgagcgctgttatgaagac
ttttacgaggatgttcatacagagttcttgaagttcggagaaattataaatttcaaggtg
tgcataaatggtgcaccccacttgcggggaaatgtgtacgtacagtacagtgcactggag
tcagctttggttgcgcatcaatctgtcaatggtcgctactttgctgggaagcagataagt
tgtgacttcatcaatgtgaccagatggaaggttgccatatgtggggaatatgtgaagtcg
agatacaagacatgttcccgtggtaggacatgcaattttatccactgtttccgcaatcct
ggtggagagtatgaatgggctgatagtgataggccacccccaaaatattgggtggaaaag
atggttgcattatttggttattctgatgcatacaagaaacatatgatggaggataactct
ggacagctgaggaactctagcaagaagtcaatgacagattcacagaggtatgttgtgcaa
agatctagttctcgagatgggagttactcaagttttgctggttctagtagaagatacgac
aatgaaaattatgctccgaagggcaccggccaccgtagaccttcaggtgaagagaatgct
tacttgaaggactttaatcacaggaagaacagaaagtattatattgaaagagtttcaaga
tag

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