Rosa chinensis (China rose): 112184614
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Entry
112184614 CDS
T06020
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn00040
Pentose and glucuronate interconversions
rcn01100
Metabolic pathways
Module
rcn_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112184614
Enzymes [BR:
rcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
112184614
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
112184614
NCBI-ProteinID:
XP_024178638
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Position
2:complement(57867171..57869502)
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AA seq
407 aa
AA seq
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MRNILVNLLMFYSIASSNFSFGHGQTTFNVLDYGAVGDGDTDDSEAFLKAWNASCSTNAS
NGTPTLVIPAERTFLLQPTIFSGSCNSNDGIRVEILGKIVAPKNPDEWKGCVESWLSFRN
LSNLIINGTGEINGQGSLWWSNITTQPNKALHLFKCSNLQLSGLAHIDSPKAHISINRSN
NVTVSNLHIRAPEDSPNTDGIDISVSTHVNIHDSTIATGDDCIAINNGSSFINITNIACG
PGHGISVGSLGVNESYQTVEEIQVRNCSFNGTQNGARIKTWQGGSGYARKITFEHITLIA
AKHPIIIDQHYCNGKHDCKKSTQAVEVSDVTYSDFQGTSSSEEAIVFNCTETPGCTNIIM
NQINITSAVAYQNIYAFCDNANGTYSTTVPPVPCLKTNETISFNLYT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatatacttgtcaaccttttgatgttttactctattgcttcatcaaattttagt
tttggacatgggcaaacaacttttaatgtgctggattatggtgctgttggagatggcgat
acagatgattctgaagcattcttaaaagcatggaatgcctcatgttcaaccaacgctagt
aacgggacaccaacactagtaataccagcagagagaacattccttttgcaacctaccatc
ttctcaggttcttgcaattctaacgacggtatccgggtcgagattctggggaaaattgtg
gcacccaaaaatccagatgaatggaaagggtgtgtagaatcttggttatcttttcgaaat
ttgagcaacctcataataaatggaacgggagaaattaatggccaaggttcactttggtgg
agcaatattaccacccaacctaacaaagctctacaccttttcaaatgcagtaatcttcag
ttaagcggactcgcacatattgacagtccaaaggctcatattagcatcaaccgtagcaat
aatgtcaccgtctctaatcttcatattcgtgcacctgaagatagtcctaacacggatggt
attgacatctctgtctcaacacatgtcaatattcatgactcaacaatagcaactggtgat
gattgtattgccattaataatggttcatcttttatcaatatcaccaatattgcatgtgga
cctggtcatggaattagtgtgggaagtttaggtgtgaatgaaagttaccagacggtagaa
gagatacaagtacgaaattgtagtttcaacggtacacaaaatggagcgagaattaagaca
tggcagggtggttctggatatgctaggaagataacatttgaacacataacactaatagcc
gcgaagcatcctatcatcattgaccaacattactgtaatggaaagcacgactgtaaaaaa
tcgactcaggcagtagaagtgagtgatgtcacatatagtgattttcaaggaacttcttca
agtgaggaggcgattgtgtttaattgcaccgagacaccgggttgtaccaacattattatg
aatcaaatcaatatcacttcggcagttgcttatcagaacatttacgccttttgtgacaat
gcgaatggaacttatagcacaactgttcccccagtcccttgcttgaagacaaatgaaaca
atatcttttaatctatatacatag
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