Rosa chinensis (China rose): 112189256
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Entry
112189256 CDS
T06020
Name
(RefSeq) serine/threonine-protein kinase VPS15
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
rcn
Rosa chinensis (China rose)
Pathway
rcn04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
112189256
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rcn01001
]
112189256
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcn04131
]
112189256
Enzymes [BR:
rcn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112189256
Protein kinases [BR:
rcn01001
]
Serine/threonine kinases: Other
VPS15 family
112189256
Membrane trafficking [BR:
rcn04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112189256
Autophagy
Autophagosome formation proteins
PI3K complex
112189256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
WD40
PK_Tyr_Ser-Thr
HEAT
NBCH_WD40
HEAT_2
Tti2
APH
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
112189256
NCBI-ProteinID:
XP_024184320
LinkDB
All DBs
Position
1:21419420..21427515
Genome browser
AA seq
1555 aa
AA seq
DB search
MGNKIARTTQVSASEYYLHDLPSSYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRG
DSIDLREYERRLFHIKETFRALDHPHLWPFQFWQETDKAAYLVRQYFFNNLHDRLSTRPF
LSLIEKKWLAFQLLLAVKQCHDKGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDD
PSDFSFFYDTGGRRLCYLAPERFYEHGGEMQVAQDAPLRPSMDIFAVGCVIAELFLEGQP
LFELSQLLAYRRGQYDPSQLLEKIPDCGIRKMILHMIQLEPELRLSADSYLQEYTTIVFP
SYFSPFLHNFHCFWNPLHSDMRVALCQSVFPEILKQMMSNRSSQDTSTGHGTPSNIHAVS
GKSSQDMIAMQNMNLTKGSPGKKVEMDKGFKRDQFELLGDINTLLRDVKQSNHYSNMKPM
VEDNTNSAFSQNLGNYGMQSPGELLQTISHAFRRNDHPFLKKITMNDLNSLMSKYDSQSD
TFGMPFLPLPEDSLRCEGMVLITSLLCSCIRNVKLPHLRRRAILLLKSSALYIDDENRLQ
RVIPYVVAMLSDQAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDTEE
SVRICYASNIAKLALTAYGFLVHSITLSEAGVLDELSSPKKLLASSSETSGQLHKVNNDA
QLAQLRKSIAEVIQELVMGPKQTPNIRRALLQDISNLCCFFGQRQSNDFLLPILPAFLND
RDEQLRAVFYGQIVYVCFFVGQRSVEEYLLPYIEQAVSDATEAVIVNALDCLAILCKSGY
LRKRILLEMIERSFPLLCYPSQWVRRSAVSFIAASSDCLGAVDSYVFLAPVIRPLLRRQP
ASLASEKALLSCLKPPVSRQVFYQVLENARSSDMLERQRKIWYNSWPQSKQWESVDLLHK
GVVELNSMRSWTDDQESPEGQKHSGNDLQQGKLTECDDGEAKFGCMGSFTRNGSSTVDIH
DPLSSEKLQYSGFMWPQGSTVNSFMCDKSSVGIPLYSFSMDRRAVGVPPAPSDSSLQVSS
VGVGASSMPWMDPVNKSFSLASSVPAPKLVSGSFNISSGSKQFYRVVHEPDGRDNDQTTF
VNSKFQDMGLSSATKASSITVEDASSTSDLTGLPSSTRASSIPDSGWRPRGVLVAHLQEH
RSAVNDIAVSTDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHMEGSRALCSVMLRG
CAQVVVGACDGMIHMFSVDYISRGLGNVVEKYSGVADIKKKDTKEGAILSLLNFSADNYA
NQMVMYSTQNCGIHLWDIRTNSDSWTLKATPEEGYVSSLVTGPCENWFVSGSSRGVLTLW
DMRFLIPVNTWQYSAVCPIEKMCLFLPPPNASVSAAARPLVYVAAGCNEVSLWNAENGTC
HQVLRVASYESDAEMSEVPWALARSSTKNSKADMRRNVNPHYRVDELNEPPPRIPGIRSL
LPLPGGDLLTGGTDLKIRRWDHYSPDRSYCICGPNLKGVGNDDFYGMRSSFGVQVVQETK
RRPLTTKLTAKAVLAAAATDTAGCHRDSILSLASVKLNQRHLISSSRDGAIKVWK
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaagatcgcgcggacgacccaggtgtcggcgtcggagtattacctgcacgac
ctgccgtcgtcctacaacctcgtgctgaaagaggttttaggtcgcggacgcttcttcaag
tcgattcagtgcaagcacgacgagggtttggtcctcgtcaaggtctatttcaagcgcggc
gactccatcgatctccgcgagtacgagcgccgtctcttccatatcaaggagacctttcgc
gccctcgatcaccctcacctctggcccttccagttttggcaagagacggataaagcagct
tatcttgtgagacaatacttcttcaataatctgcatgatcgattgagcacgcgccccttt
ctcagtctcatcgaaaagaaatggttggcttttcagttacttcttgctgtgaaacagtgc
catgacaaaggaatatgtcacggtgacattaagtgcgagaatgtcctggtgacttcttgg
aattggctctatcttgctgactttgcatccttcaaacccacttacattccgtatgatgac
ccttctgatttctcgtttttctacgacaccggaggaagaaggctttgttatcttgctccc
gagagattttatgagcatggaggtgagatgcaagttgcgcaagatgcaccattaagacca
tctatggatatctttgctgtagggtgtgtgattgctgagctttttcttgagggtcagccc
ctatttgaactctctcaacttctcgcttatcgtagagggcaatacgatcctagtcaactt
cttgaaaagataccagattgtggaatccgcaaaatgatacttcatatgattcagttggaa
ccagagttgcgactttctgctgatagctacctgcaggagtatacaactattgtgtttccg
agttacttctctccatttctgcataattttcattgtttctggaatccgcttcattctgat
atgagggttgcactttgccagagtgtttttcctgagatactgaaacaaatgatgagcaat
aggtcatctcaggacactagcactggacatggaactccttcaaacatccatgctgttagc
ggtaaatcttctcaggacatgattgcaatgcagaacatgaatttgacaaagggctcaccg
ggaaagaaagtagagatggataaaggtttcaagcgcgatcaatttgaacttctcggtgat
atcaatacgcttcttagggatgttaaacagagcaatcattattctaatatgaagccaatg
gtggaggacaacactaattctgcattttcccagaatcttggaaactatggcatgcaatct
cctggtgaattacttcagactatctcccatgcatttaggagaaatgatcatccttttcta
aaaaagattacaatgaatgatctgaattcattgatgtccaagtatgacagccagtcagat
acctttggtatgccttttttaccattacctgaagacagtttgagatgtgagggcatggtt
ctgattacctctttgctatgttcctgcatacgcaatgtcaaattgcctcatttaaggagg
agggcgatacttttgctgaagtcatctgcattgtatattgatgatgaaaacaggttgcag
cgtgtaattccatatgttgttgcaatgctttcagatcaagctgcaattgtgcgttgtgca
gccttggagacgttatgtgacattctccctttagttcgagattttcctcctagtgatgca
aaaatttttccagagtatattctaccaatgctttccatgcttcctgatgatacagaggaa
agtgtgaggatatgttatgccagtaatatagctaagctggcactaactgcttatggtttt
ttagttcactcaataaccttgagtgaggctggtgtgcttgatgaattaagttctccaaag
aagctactggcatcatctagtgagacatctggtcagctccacaaggtaaataatgatgca
cagcttgcccagttgaggaagtccatagctgaagtcattcaagagcttgttatgggtccc
aagcaaactcccaatatcaggagagcactccttcaggatatcagcaatctatgctgcttc
tttggccagaggcagagtaatgactttttgttacccattctccctgcttttctgaatgat
cgagatgagcagctaagagcagtattctacgggcaaattgtgtatgtatgcttctttgtg
ggtcaaagaagtgtggaagaatatcttttaccttatattgagcaggctgtaagtgatgct
acagaggctgttattgtcaatgcattggactgtttggccattttgtgcaaaagtggttat
ctgcgcaagaggatactcctggaaatgattgagcgttcatttccattgttatgctatcct
agtcaatgggtaagaaggtcggctgttagttttattgcagccagcagtgattgcttgggt
gcagtagattcctatgtattccttgctcctgttattcgtccccttcttcgtagacagcca
gcatctctagcttctgagaaggctctcctttcatgtttgaagcctcctgtctcaagacag
gtattttaccaagttctagaaaatgcaaggagttcagacatgttggaaagacagagaaag
atatggtacaattcttggcctcaatctaaacaatgggaaagtgtggatttacttcataaa
ggggttgtcgaattgaattcgatgaggagctggacagacgaccaagaaagtcccgagggt
caaaaacattctggaaatgatttgcaacagggaaagctaactgaatgtgatgatggtgag
gctaagtttggatgtatgggaagctttacgcgcaatggttcgagcacagttgacattcat
gatcctttatcctctgaaaagttgcagtattcgggctttatgtggccacagggaagtact
gtgaatagcttcatgtgtgataaatcatcagtagggatacctttgtactcatttagcatg
gacaggcgagcagtgggagttcctcctgctccatctgactcttcattacaagtgagttct
gtaggagttggtgcatcatctatgccatggatggatccagtaaataaatcttttagttta
gctagttctgttccagcacccaagctcgtgtcaggatcattcaacatcagcagtggttct
aaacaattctacagagtagtacatgaaccagatggtagggataatgaccaaacaaccttt
gtcaatagcaaatttcaagatatggggttatctagtgcaacaaaagcaagttctattact
gtggaagatgcatcctctacaagtgatctaacaggattgccctcttctacaagagcttcg
tcaattccagattctggttggaggcctcgtggggttttggttgcacacttgcaagagcac
cggtctgctgtgaatgacatagccgtatcaactgatcatagcttctttgtgagtgcatct
gatgattccactgtcaaggtatgggattcgagaaagttggaaaaggacatctcctttagg
tcaagattgacttatcatatggagggaagccgtgcactatgttctgtaatgctccggggc
tgcgctcaagttgtagttggagcatgtgatggcatgatacatatgttttctgttgattac
atttccagaggtctcggtaatgtagttgagaagtattcaggtgttgctgatatcaagaag
aaggacactaaagaaggggcaattcttagccttttgaatttctctgctgacaactatgca
aatcagatggttatgtacagtacccaaaattgtgggatccatctttgggatataagaacg
aattcagattcttggacattgaaagcaactccggaggagggctatgtatcttccctagta
acaggcccttgtgaaaattggtttgtgtcaggatcttcaaggggtgtgctcactctttgg
gatatgaggttccttattcctgtgaatacatggcagtattctgctgtttgccccatagag
aaaatgtgtcttttccttcctcctccaaatgcttctgtttctgctgctgcaaggcccctt
gtttatgttgctgcaggttgcaatgaagtctctctttggaatgcagaaaatggcacctgc
caccaggtgttgagggttgcgagttatgaaagtgatgctgaaatgtctgaggtgccttgg
gctttggcaagatcatcaactaaaaattccaaagcggatatgagacggaatgtcaatcct
cattacagagttgatgaactgaatgaaccacctcctcgcattcctggcatccgttcattg
cttcccttacctgggggtgatttgttaactgggggaaccgacttgaagatacgtcgatgg
gatcattacagccctgatcgaagttactgtatttgtgggccaaacttgaagggtgttgga
aatgatgatttttatggaatgcggtctagctttggcgtgcaagttgtgcaggagacaaag
agacggcctctaacaacaaagttgacagccaaggcagttcttgcagctgctgccactgat
actgctggctgccatcgtgattcaatcctttcattggcctctgttaagttgaatcaaaga
cacttaatatcaagcagtagagatggggcaatcaaggtctggaagtga
DBGET
integrated database retrieval system
