Rhodobacter capsulatus: RCAP_rcc02429
Help
Entry
RCAP_rcc02429 CDS
T01213
Symbol
xthA1
Name
(GenBank) exodeoxyribonuclease III-1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RCAP_rcc02429 (xthA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcp03400
]
RCAP_rcc02429 (xthA1)
Enzymes [BR:
rcp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RCAP_rcc02429 (xthA1)
DNA repair and recombination proteins [BR:
rcp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RCAP_rcc02429 (xthA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ADE86159
UniProt:
D5ALU8
LinkDB
All DBs
Position
2605660..2606439
Genome browser
AA seq
259 aa
AA seq
DB search
MKIATFNINGIKARAEALPAWLRAAEPDVVLLQEIKSTDEAFPQEVLDGTGYTVHTHGQK
SFNGVAILSRLPLEDVTRGLPGDDSDDQARWIEATVIGTRAVRVCGLYLPNGNPAPGPKY
DYKLAWMARMQARVETLLRSEEPLVFAGDYNVIPQDEDAAKPESWRADALALPETRAAFR
RIVNLGLTDAFRARVPGPGQYSFWDYQAGAWQKNNGIRIDHLLLSPQAADLLRDAGIDKE
VRAGEKPSDHVPVWIDLDA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccaccttcaacatcaacggcatcaaggcccgcgccgaggccctgcccgcc
tggctgcgcgcggccgagcccgatgtcgtgctgctgcaggagatcaagtcgaccgacgaa
gccttcccgcaggaggtgctggacggtaccggctacacggtgcacacgcacgggcagaaa
agcttcaacggcgtcgcgatcctgagccggttgccgctggaggatgtgacgcgcggcctg
cccggcgacgacagtgacgaccaggcccgctggatcgaggcgacggtgatcggcacccgc
gcggtgcgggtctgcgggctgtatctgcccaatggcaaccccgcgccggggccgaagtat
gactacaagctggcctggatggcgcggatgcaggcgcgggtggaaaccctgctgcgcagc
gaggagccgctggttttcgcgggcgattacaacgtgatcccgcaagacgaggatgccgcg
aaaccggaaagctggcgcgcggatgcgctggccctgcccgagacccgcgcggcgttccgg
cggatcgtgaaccttggcctgaccgatgccttccgcgcccgcgtgccgggcccggggcag
tattcgttctgggattatcaggcgggggcctggcaaaagaacaacggcatccgcatcgac
cacctgctgctttcgccgcaggcggccgatctgttgcgcgatgcgggcatcgacaaggag
gtccgcgcgggcgagaaaccctcggaccatgtcccggtctggatcgatctggacgcctga
DBGET
integrated database retrieval system