KEGG   Rhodobacter capsulatus: RCAP_rcc02429
Entry
RCAP_rcc02429     CDS       T01213                                 
Symbol
xthA1
Name
(GenBank) exodeoxyribonuclease III-1
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
rcp  Rhodobacter capsulatus
Pathway
rcp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rcp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RCAP_rcc02429 (xthA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcp03400]
    RCAP_rcc02429 (xthA1)
Enzymes [BR:rcp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     RCAP_rcc02429 (xthA1)
DNA repair and recombination proteins [BR:rcp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     RCAP_rcc02429 (xthA1)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: ADE86159
UniProt: D5ALU8
LinkDB
Position
2605660..2606439
AA seq 259 aa
MKIATFNINGIKARAEALPAWLRAAEPDVVLLQEIKSTDEAFPQEVLDGTGYTVHTHGQK
SFNGVAILSRLPLEDVTRGLPGDDSDDQARWIEATVIGTRAVRVCGLYLPNGNPAPGPKY
DYKLAWMARMQARVETLLRSEEPLVFAGDYNVIPQDEDAAKPESWRADALALPETRAAFR
RIVNLGLTDAFRARVPGPGQYSFWDYQAGAWQKNNGIRIDHLLLSPQAADLLRDAGIDKE
VRAGEKPSDHVPVWIDLDA
NT seq 780 nt   +upstreamnt  +downstreamnt
atgaagatcgccaccttcaacatcaacggcatcaaggcccgcgccgaggccctgcccgcc
tggctgcgcgcggccgagcccgatgtcgtgctgctgcaggagatcaagtcgaccgacgaa
gccttcccgcaggaggtgctggacggtaccggctacacggtgcacacgcacgggcagaaa
agcttcaacggcgtcgcgatcctgagccggttgccgctggaggatgtgacgcgcggcctg
cccggcgacgacagtgacgaccaggcccgctggatcgaggcgacggtgatcggcacccgc
gcggtgcgggtctgcgggctgtatctgcccaatggcaaccccgcgccggggccgaagtat
gactacaagctggcctggatggcgcggatgcaggcgcgggtggaaaccctgctgcgcagc
gaggagccgctggttttcgcgggcgattacaacgtgatcccgcaagacgaggatgccgcg
aaaccggaaagctggcgcgcggatgcgctggccctgcccgagacccgcgcggcgttccgg
cggatcgtgaaccttggcctgaccgatgccttccgcgcccgcgtgccgggcccggggcag
tattcgttctgggattatcaggcgggggcctggcaaaagaacaacggcatccgcatcgac
cacctgctgctttcgccgcaggcggccgatctgttgcgcgatgcgggcatcgacaaggag
gtccgcgcgggcgagaaaccctcggaccatgtcccggtctggatcgatctggacgcctga

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