Rhodobacter capsulatus: RCAP_rcc02810
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Entry
RCAP_rcc02810 CDS
T01213
Symbol
rluD
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rcp
Rhodobacter capsulatus
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcp03009
]
RCAP_rcc02810 (rluD)
Enzymes [BR:
rcp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
RCAP_rcc02810 (rluD)
Ribosome biogenesis [BR:
rcp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RCAP_rcc02810 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ADE86539
UniProt:
D5AP34
LinkDB
All DBs
Position
3000852..3001895
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AA seq
347 aa
AA seq
DB search
MSDIAAHLLRIEIGEDPAERLDKALAALVPEEAALSRSRLARLIAEGAVTRDGVAITDQK
AKVAPGEVYMIAVEPPRAVETLAQDIPLTVLWEDEDLIVIDKPAGMVVHPAPGSEDGTLV
NALLHHFGGRLSGIGGEARPGIVHRIDKETSGLLVVAKSDRAHHGLAAQFEKHTVHRHYT
ALVQGVPSAADPRLRGIRGVNFEQGGILKITSQLARHPTDRQRQAVLFTGGRHAVTRART
VEAFGGVAALMDCWLETGRTHQIRVHMAHVGHGLVGDPTYGGKRKLSVRAVGAAAAEAVA
NFPRQALHATTLGFTHPVTGEELSFTSPLPEDFEALLATLRAGPQIT
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacatcgcggcacacctcctgcgcatcgaaatcggcgaagaccccgccgagcgg
cttgataaggcattggcggcgcttgtgccagaagaagcggcgctgtcgcgctcgcgtctg
gcccggctgatcgccgagggcgcggtgacacgggacggcgtcgcgatcaccgatcagaag
gccaaggtcgccccgggcgaggtctacatgatcgcggttgagccgccccgcgcggtcgaa
accctggcgcaggacattccgctgaccgtgctttgggaagacgaggacctgatcgtgatc
gacaagcccgcggggatggtggtgcatccggcgcccggctccgaggacggcacgctcgtc
aatgcgctgcttcatcatttcggcggcaggctgtcgggcatcggcggcgaggcgcggccg
ggcatcgtgcaccggatcgacaaggaaacctcgggcctgctcgtcgtggcgaaatccgac
cgcgcgcatcacggccttgcggcgcaattcgagaaacacacggtgcaccgccattacacc
gcgctggtgcagggcgtgccctctgccgccgatccgcggctgcgcggcatccgcggggtg
aatttcgaacagggcggcatcctgaagatcacctcgcagctcgcccgccacccgaccgac
cggcagcgccaggcggtgctgttcaccggcgggcgccatgcggtgacccgcgcccgcacg
gtcgaggcctttggcggcgtcgcggccttgatggattgctggctcgaaaccgggcgcacg
catcagatccgggtgcatatggcgcatgtggggcatgggctggtgggcgatccgacctat
ggcggcaagcggaaactctcggtccgcgcggtcggtgccgccgcggccgaggcggtggcc
aatttcccccgtcaggcgctgcatgcgacgacgctgggctttacccatccggtcaccggc
gaggagctcagcttcacctcccccctgcccgaagatttcgaggcgctgctggcaaccttg
cgcgccgggccgcagatcacctga
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