KEGG   Rhodobacter capsulatus: RCAP_rcc03218
Entry
RCAP_rcc03218     CDS       T01213                                 
Symbol
ruvB
Name
(GenBank) holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
rcp  Rhodobacter capsulatus
Pathway
rcp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rcp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    RCAP_rcc03218 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcp03400]
    RCAP_rcc03218 (ruvB)
Enzymes [BR:rcp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RCAP_rcc03218 (ruvB)
DNA repair and recombination proteins [BR:rcp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     RCAP_rcc03218 (ruvB)
    RecFOR pathway proteins
     RCAP_rcc03218 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase AAA_3 RNA_helicase AAA_22 AAA_14 AAA_16 AAA_2 Rad17 TsaE AAA_33 AAA_17 nSTAND3 AAA_28 AAA_18 Bac_DnaA AAA_24 NB-ARC NACHT Cytidylate_kin ABC_tran AAA_11 Parvo_NS1
Other DBs
NCBI-ProteinID: ADE86942
UniProt: D5ARD7
LinkDB
Position
3417679..3418716
AA seq 345 aa
MTEPDPTLRPDRLPEDADRALRPQVLEEFIGQAEARANLRVFIESAKMRGQAMDHTLFHG
PPGLGKTTLAQIMARELGVNFKMTSGPVLARAGDLAAILTNLENRDVLFIDEIHRMNPAV
EEVLYPAMEDFELDLVIGEGPAARTVRIELQPFTLVGATTRLGLLTTPLRDRFGIPTRLQ
FYTEDELDLIVSRGARLLGIPADPDGTREIAKRARGTPRIAGRLLRRVVDFALVEGDGRL
TRKLADNALTRLGVDHLGLDGADRRYMMLMAEHYGGGPVGVETLSAALSESRDALEEVIE
PYLLQQGLIQRTPRGRMLGHRAWRHLGLEAPQTQVPVQTDLFDAG
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgaccgaacccgatccgaccctccgccccgaccgcctgcccgaggacgccgaccgcgcc
ctgcgcccgcaggtgctggaggagttcatcggtcaggccgaggcccgggcgaacctgcgc
gtcttcatcgaaagcgcgaagatgcgcggtcaggcgatggatcacacgctgtttcacggc
ccgcccggtctgggcaagaccacgctggcgcagatcatggcgcgggaactgggggtgaat
ttcaagatgacctccggcccggttctggcgcgggcgggcgatctggcggcgatcctgacc
aaccttgaaaaccgcgacgtccttttcatcgacgagatccaccggatgaacccggcggtc
gaggaggtgctttaccccgcgatggaggatttcgagctcgatctggtgatcggtgaaggc
ccggccgcgcgcaccgtgcgcatcgagctgcagcccttcaccctggtcggcgccacgacg
cggctgggcctgctcaccacgccgctgcgcgaccgcttcggcattccgacccggctgcaa
ttttacaccgaggacgagctggacctgatcgtcagccgcggcgcccggcttctgggcatt
cccgccgatccggatggcacgcgcgagatcgccaagcgcgcccgcggcacgccgcggatt
gccgggcggcttttgcgccgcgtcgtcgatttcgcgctggtcgagggcgacgggcggctc
acccgcaaactggccgacaatgcgctgacgcggctgggcgtcgatcatctggggctcgat
ggcgccgaccggcgctacatgatgctgatggcggaacattacggcggcgggccggtgggg
gtggagacgctgtccgccgcgctgtcggaaagccgcgatgcgctggaagaggtgatcgag
ccttaccttttacagcagggtctcattcagcgcaccccgcgcgggcggatgctggggcat
cgggcctggcggcatctggggctcgaggcgccgcagacgcaagttccggtccagaccgac
cttttcgacgcgggctga

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