Rhodobacter capsulatus: RCAP_rcc03218
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Entry
RCAP_rcc03218 CDS
T01213
Symbol
ruvB
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rcp
Rhodobacter capsulatus
Pathway
rcp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RCAP_rcc03218 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcp03400
]
RCAP_rcc03218 (ruvB)
Enzymes [BR:
rcp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RCAP_rcc03218 (ruvB)
DNA repair and recombination proteins [BR:
rcp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RCAP_rcc03218 (ruvB)
RecFOR pathway proteins
RCAP_rcc03218 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
RNA_helicase
AAA_22
AAA_14
AAA_16
AAA_2
Rad17
TsaE
AAA_33
AAA_17
nSTAND3
AAA_28
AAA_18
Bac_DnaA
AAA_24
NB-ARC
NACHT
Cytidylate_kin
ABC_tran
AAA_11
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
ADE86942
UniProt:
D5ARD7
LinkDB
All DBs
Position
3417679..3418716
Genome browser
AA seq
345 aa
AA seq
DB search
MTEPDPTLRPDRLPEDADRALRPQVLEEFIGQAEARANLRVFIESAKMRGQAMDHTLFHG
PPGLGKTTLAQIMARELGVNFKMTSGPVLARAGDLAAILTNLENRDVLFIDEIHRMNPAV
EEVLYPAMEDFELDLVIGEGPAARTVRIELQPFTLVGATTRLGLLTTPLRDRFGIPTRLQ
FYTEDELDLIVSRGARLLGIPADPDGTREIAKRARGTPRIAGRLLRRVVDFALVEGDGRL
TRKLADNALTRLGVDHLGLDGADRRYMMLMAEHYGGGPVGVETLSAALSESRDALEEVIE
PYLLQQGLIQRTPRGRMLGHRAWRHLGLEAPQTQVPVQTDLFDAG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacccgatccgaccctccgccccgaccgcctgcccgaggacgccgaccgcgcc
ctgcgcccgcaggtgctggaggagttcatcggtcaggccgaggcccgggcgaacctgcgc
gtcttcatcgaaagcgcgaagatgcgcggtcaggcgatggatcacacgctgtttcacggc
ccgcccggtctgggcaagaccacgctggcgcagatcatggcgcgggaactgggggtgaat
ttcaagatgacctccggcccggttctggcgcgggcgggcgatctggcggcgatcctgacc
aaccttgaaaaccgcgacgtccttttcatcgacgagatccaccggatgaacccggcggtc
gaggaggtgctttaccccgcgatggaggatttcgagctcgatctggtgatcggtgaaggc
ccggccgcgcgcaccgtgcgcatcgagctgcagcccttcaccctggtcggcgccacgacg
cggctgggcctgctcaccacgccgctgcgcgaccgcttcggcattccgacccggctgcaa
ttttacaccgaggacgagctggacctgatcgtcagccgcggcgcccggcttctgggcatt
cccgccgatccggatggcacgcgcgagatcgccaagcgcgcccgcggcacgccgcggatt
gccgggcggcttttgcgccgcgtcgtcgatttcgcgctggtcgagggcgacgggcggctc
acccgcaaactggccgacaatgcgctgacgcggctgggcgtcgatcatctggggctcgat
ggcgccgaccggcgctacatgatgctgatggcggaacattacggcggcgggccggtgggg
gtggagacgctgtccgccgcgctgtcggaaagccgcgatgcgctggaagaggtgatcgag
ccttaccttttacagcagggtctcattcagcgcaccccgcgcgggcggatgctggggcat
cgggcctggcggcatctggggctcgaggcgccgcagacgcaagttccggtccagaccgac
cttttcgacgcgggctga
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