Ricinus communis (castor bean): 8268788
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Entry
8268788 CDS
T01087
Name
(RefSeq) cysteine desulfurase 1, chloroplastic isoform X2
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00450
Selenocompound metabolism
rcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
8268788
Enzymes [BR:
rcu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
8268788
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
8268788
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
DUF4493
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
8268788
NCBI-ProteinID:
XP_002523229
UniProt:
B9SB60
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Position
1:complement(34677802..34688835)
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AA seq
469 aa
AA seq
DB search
MMMMMDGVVFKLPSIKLLNPKSTTHSSPIRLAKFSSFAIPALATTGTEGDQALHASLSLG
HITRPDFPILHQEVNGSKLVYLDNAATSQKPNSVLKAIQNYYESYNSNVHRGIHYLSAKA
TDEYELARKKVAAFINASDSREIVFTRNATEAINLVAYSWGFTNLKPGDEVILTLAEHHS
NIVPWQLVANRTGAVLRFVDLNENEVPDVLKLKETISEKTKLVVVHHISNVLASFLPVED
IIHWAHGAGAKVLIDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLYGKSDILST
MPPFLGGGEMIADVFLDHSTYADPPSRFEAGTPAIGEAIGLGAAIDYLLGIGMQKIHDYE
MELANYLYESLSSVPSVRIYGPKPSENVHRAALCSFNVENIHPTDIATFLDQQHGVAIRS
GHHCAQPLHRHLGVNASARASLHFYNTKEDVDDFIQALNDTINFFNSFK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatggatggcgttgtttttaaacttccatcaattaaactcctaaatcct
aaatccacaactcattcttctccaattagattagccaaattctcttcttttgctatacca
gcattagctacaactgggacagaaggagatcaggctcttcacgcttctttatctcttggc
cacatcactagacctgatttcccaattctccatcaggaggtaaatggatcaaaacttgtc
tatctagataatgctgcaacatcccagaagcctaattctgtattgaaggctatacagaat
tattatgaatcttataattctaatgttcatcgaggaattcactacttaagtgcaaaagca
actgatgagtatgagttggctagaaagaaggtggcagctttcataaatgcgtcagactct
agagagattgtttttactaggaatgctactgaagccattaatctcgtagcttacagttgg
ggctttacgaatttaaaaccaggagatgaggttatactcacacttgctgagcatcacagt
aatattgttccctggcaacttgtagctaacagaactggtgccgtcctgagatttgtagat
ttaaatgaaaatgaggttcctgatgtactgaagttaaaagaaacaatctcagagaagaca
aaacttgtagttgttcatcacatctctaacgttcttgcttctttccttcctgttgaagac
ataatccattgggcacatggtgctggagcaaaagtgcttatagatgcatgtcaaagcgta
ccgcacatggtggttgatgtccaggggctggatgctgatttccttgttgcttcttctcac
aagatgtgtgggcccacaggcatcggattcttatatggtaaaagtgatatcttgtccaca
atgcctccatttttaggtggtggagaaatgatcgctgatgtattcttagatcattctact
tatgcagatcctccatcaagatttgaggcaggaactccagcaattggagaagcaattggg
ctaggagcagcaattgattatttgttaggaattggcatgcaaaagattcatgactatgag
atggagttggctaattatctgtatgaaagccttagctctgtccccagtgttcgtatctat
ggtccaaaaccttcagaaaatgttcatcgagcagctctctgttccttcaatgttgagaat
attcacccaactgatattgcaacttttttggatcaacagcatggagtggctatcagatca
ggtcaccactgtgcgcaacctcttcatcggcatttaggagtaaatgcaagtgcacgcgct
agtctccatttctacaacactaaagaggatgttgatgatttcatccaggcactcaatgac
acaatcaacttcttcaattctttcaagtaa
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